Factsheet for TraesCS6A01G380900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G366200.1	Wheat	cytosol	77.86	86.67
TraesCS6A01G381400.1	Wheat	cytosol	77.08	85.8
TraesCS6A01G381100.1	Wheat	cytosol	56.77	78.14
HORVU6Hr1G089340.1	Barley	mitochondrion	77.34	76.94
Os02t0808800-01	Rice	cytosol	66.93	76.04
EES05992	Sorghum	cytosol	64.84	75.23
Os02t0811400-00	Rice	cytosol	65.89	75.07
TraesCS6A01G380800.1	Wheat	cytosol	62.5	70.59
OQU85928	Sorghum	cytosol	62.24	69.68
Os02t0811800-01	Rice	cytosol	60.68	68.73
Zm00001d051938_P002	Maize	cytosol	65.1	67.57
TraesCS5A01G410100.1	Wheat	cytosol	58.85	67.46
TraesCS5A01G410400.1	Wheat	cytosol	59.38	67.46
Os02t0811600-00	Rice	cytosol	50.0	65.53
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	60.94	62.07
TraesCS5A01G225100.3	Wheat	cytosol, plastid	46.88	51.72
TraesCS7A01G149000.1	Wheat	cytosol	46.35	51.59
TraesCS5A01G061700.1	Wheat	cytosol	42.97	48.67
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	41.67	47.62
TraesCS5A01G163400.1	Wheat	cytosol	43.49	46.78
TraesCS5A01G061800.1	Wheat	cytosol	30.73	42.29
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	23.44	41.28
TraesCS5A01G473600.1	Wheat	cytosol	33.33	38.79
TraesCS4A01G331900.2	Wheat	golgi, unclear	32.81	38.18
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	42.19	38.03
TraesCS3A01G046700.1	Wheat	cytosol	32.55	37.99
TraesCS3A01G348600.1	Wheat	cytosol	30.99	36.28
TraesCS5A01G271200.1	Wheat	mitochondrion	31.77	35.06
TraesCS5A01G517000.1	Wheat	mitochondrion	32.81	34.9
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	30.21	30.85

Protein Annotations

EnsemblPlants:TraesCS6A01G380900.1	EnsemblPlantsGene:TraesCS6A01G380900	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353
PFAM:PF13460	SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:35.1	:

Description

No Description!

Coordinates

chr6A:-:600976584..600978178

Molecular Weight (calculated)

42299.1 Da

IEP (calculated)

7.168

GRAVY (calculated)

-0.046

Length

384 amino acids

Sequence
(BLAST)

001: MPSIDKATDN GELKQRQPEQ ELVCVTGAGG FIGSWVVKEL LLRGYRVRGT ARDLVVSASD RKNAQLLALQ GAHERLTLCR ANVLDYDGLR AAFRGCKGVF
101: HVASSVSNDP ASSLPLLCLL LEVSGFLQGP RTYLLHLHVL LVLQDLVPVT VEGTRNVISA AADADVRRVV FTSSYGAVHM DPNRSPDTVL DETCWSDYDF
201: CKSTGLRHCC CAKMMAEITA TEEAAKRGLE LAVVVPSMTM GPMLQPALNF SSNHVARYLT GAEPTYPNAV ATYTDVHDVT HAHVLVYEHP EACGRYLCIG
301: AVLHRTHFLQ LLSELFSQYH ITAKCEDDGK PMAKPYKFSN RRLTDLGLEF TPVRESLYER VTCLQKKGHL PLPVDPLAPK CAYL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.