Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4D01G343400.1 | Wheat | cytosol | 88.92 | 94.69 |
HORVU4Hr1G085100.1 | Barley | cytosol | 85.04 | 82.53 |
TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 45.43 | 75.23 |
TraesCS4A01G331900.2 | Wheat | golgi, unclear | 67.87 | 74.24 |
Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 68.42 | 73.51 |
KXG30065 | Sorghum | plastid | 67.59 | 73.05 |
GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 59.28 | 66.25 |
GSMUA_Achr8P24060_001 | Banana | plastid | 59.0 | 65.94 |
GSMUA_Achr8P24040_001 | Banana | plastid | 58.17 | 65.02 |
GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 58.45 | 64.33 |
Zm00001d015956_P002 | Maize | plastid | 67.31 | 63.45 |
VIT_13s0064g00290.t01 | Wine grape | cytosol, extracellular, plastid | 37.95 | 63.43 |
VIT_03s0110g00350.t01 | Wine grape | cytosol | 56.79 | 63.27 |
VIT_13s0047g00940.t01 | Wine grape | cytosol | 54.02 | 60.37 |
VIT_13s0047g00540.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 54.02 | 60.37 |
VIT_13s0064g00270.t01 | Wine grape | cytosol, endoplasmic reticulum | 53.19 | 58.9 |
VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 53.19 | 58.72 |
VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 53.19 | 58.72 |
VIT_13s0067g00460.t01 | Wine grape | endoplasmic reticulum | 52.91 | 58.59 |
VIT_13s0067g00530.t01 | Wine grape | endoplasmic reticulum | 52.63 | 58.28 |
Solyc01g087640.2.1 | Tomato | cytosol | 52.35 | 57.62 |
VIT_13s0101g00240.t01 | Wine grape | cytosol | 40.72 | 56.98 |
VIT_13s0101g00250.t01 | Wine grape | cytosol | 43.77 | 56.23 |
Bra031666.1-P | Field mustard | golgi | 48.2 | 55.06 |
CDY68009 | Canola | cytosol, endoplasmic reticulum, golgi | 48.75 | 54.66 |
VIT_15s0107g00210.t01 | Wine grape | extracellular, plastid | 51.25 | 53.62 |
Bra038342.1-P | Field mustard | cytosol, golgi, peroxisome | 47.92 | 53.23 |
CDY45844 | Canola | cytosol, golgi, peroxisome | 47.92 | 53.23 |
AT1G09490.1 | Thale cress | golgi | 47.37 | 53.11 |
CDY72415 | Canola | cytosol, endoplasmic reticulum, peroxisome | 47.65 | 52.92 |
AT1G09510.1 | Thale cress | cytosol, plastid, vacuole | 47.09 | 52.8 |
AT1G66800.1 | Thale cress | peroxisome, plasma membrane, plastid | 46.54 | 52.66 |
CDX94966 | Canola | golgi, mitochondrion, peroxisome, plastid | 46.54 | 52.17 |
AT1G09500.1 | Thale cress | endoplasmic reticulum | 46.81 | 52.0 |
VIT_13s0067g00680.t01 | Wine grape | cytosol | 39.89 | 51.99 |
CDX94965 | Canola | golgi | 46.54 | 51.69 |
CDX94967 | Canola | plasma membrane | 45.71 | 51.24 |
CDY64747 | Canola | extracellular, golgi, mitochondrion, plastid | 45.98 | 51.23 |
Bra020019.1-P | Field mustard | extracellular, golgi | 46.26 | 51.23 |
Bra020020.1-P | Field mustard | extracellular, golgi | 45.43 | 50.93 |
Bra020021.1-P | Field mustard | golgi | 45.15 | 50.62 |
CDX94968 | Canola | endoplasmic reticulum, golgi, plastid | 45.15 | 50.0 |
VIT_13s0067g00690.t01 | Wine grape | cytosol | 42.66 | 49.84 |
VIT_13s0047g00550.t01 | Wine grape | mitochondrion, vacuole | 47.09 | 49.28 |
AT1G09480.1 | Thale cress | cytosol | 47.37 | 46.34 |
CDY64748 | Canola | cytosol | 45.98 | 44.38 |
TraesCS5A01G225100.3 | Wheat | cytosol, plastid | 41.83 | 43.39 |
TraesCS5A01G473600.1 | Wheat | cytosol | 39.06 | 42.73 |
TraesCS5A01G271200.1 | Wheat | mitochondrion | 40.72 | 42.24 |
TraesCS5A01G061700.1 | Wheat | cytosol | 39.61 | 42.18 |
TraesCS5A01G061600.1 | Wheat | cytosol, mitochondrion, peroxisome | 39.06 | 41.96 |
TraesCS7A01G149000.1 | Wheat | cytosol | 39.06 | 40.87 |
TraesCS5A01G163400.1 | Wheat | cytosol | 39.89 | 40.34 |
TraesCS7A01G250100.1 | Wheat | cytosol, mitochondrion, plastid | 41.27 | 39.63 |
TraesCS3A01G348600.1 | Wheat | cytosol | 35.46 | 39.02 |
TraesCS5A01G410400.1 | Wheat | cytosol | 36.29 | 38.76 |
TraesCS6A01G381400.1 | Wheat | cytosol | 36.84 | 38.55 |
TraesCS5A01G410100.1 | Wheat | cytosol | 35.46 | 38.21 |
TraesCS6A01G380800.1 | Wheat | cytosol | 35.46 | 37.65 |
TraesCS3A01G046700.1 | Wheat | cytosol | 34.07 | 37.39 |
TraesCS6A01G381100.1 | Wheat | cytosol | 28.53 | 36.92 |
TraesCS5A01G061800.1 | Wheat | cytosol | 27.42 | 35.48 |
TraesCS6A01G381700.1 | Wheat | golgi, mitochondrion | 36.01 | 34.48 |
TraesCS6A01G380900.1 | Wheat | cytosol | 34.9 | 32.81 |
VIT_13s0047g00990.t01 | Wine grape | endoplasmic reticulum | 54.29 | 32.13 |
TraesCS6A01G147300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 36.84 | 31.22 |
Protein Annotations
EnsemblPlants:TraesCS5A01G517000.1 | EnsemblPlantsGene:TraesCS5A01G517000 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF407 | PFAM:PF01370 |
SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5A:+:680208687..680213132
Molecular Weight (calculated)
39870.9 Da
IEP (calculated)
6.422
GRAVY (calculated)
-0.053
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MALAWHQQRP PPGGRYSQRD LAMAEKQQQG SNVEEGSSTA AGKVVCVTGA SGYIASWIVK LLLDRGYTVH GTVRDTADPN KTLHLRALDG ANDRLQLFNA
101: NLLEEGSFDA AIDGCECVFH AASPVFFTIK DPKAELLDSA VSGTLNVLRS CKKASVKRVV ITSSMAAVTF NGRPRTPDVI VDETWFSVSE LCEKHQQWYV
201: LSKTLAEEAA WKFSKDNELE IVVMHPTMVI GPLLQPTLNA SVEVILNLIN GSSSTYPNFA HGWVNVKDVA LAHILAYEVP SADGRYCIVE RVVHYLELVK
301: IISKMYPNIS LPYKCGDGEP LFPTYQVWTD KIRSLGVELI PLEKTIKETI ESLKEKGFFA L
101: NLLEEGSFDA AIDGCECVFH AASPVFFTIK DPKAELLDSA VSGTLNVLRS CKKASVKRVV ITSSMAAVTF NGRPRTPDVI VDETWFSVSE LCEKHQQWYV
201: LSKTLAEEAA WKFSKDNELE IVVMHPTMVI GPLLQPTLNA SVEVILNLIN GSSSTYPNFA HGWVNVKDVA LAHILAYEVP SADGRYCIVE RVVHYLELVK
301: IISKMYPNIS LPYKCGDGEP LFPTYQVWTD KIRSLGVELI PLEKTIKETI ESLKEKGFFA L
001: MADGGKVVCV TGASGYIASW IVKLLLFRGY TINATVRDPK DRKKTDHLLA LDGAKERLKL FKADLLDEGS FELAIDGCET VFHTASPVAI TVKTDPQVEL
101: INPAVNGTIN VLRTCTKVSS VKRVILTSSM AAVLAPETKL GPNDVVDETF FTNPSFAEER KQWYVLSKTL AEDAAWRFAK DNEIDLIVLN PGLVTGPILQ
201: PTLNFSVAVI VELMKGKNPF NTTHHRFVDV RDVALAHVKA LETPSANGRY IIDGPVVTIK DIENVLREFF PDLCIADRNE DITELNSVTF NVCLDKVKSL
301: GIIEFTPTET SLRDTVLSLK EKCLV
101: INPAVNGTIN VLRTCTKVSS VKRVILTSSM AAVLAPETKL GPNDVVDETF FTNPSFAEER KQWYVLSKTL AEDAAWRFAK DNEIDLIVLN PGLVTGPILQ
201: PTLNFSVAVI VELMKGKNPF NTTHHRFVDV RDVALAHVKA LETPSANGRY IIDGPVVTIK DIENVLREFF PDLCIADRNE DITELNSVTF NVCLDKVKSL
301: GIIEFTPTET SLRDTVLSLK EKCLV
Arabidopsis Description
At1g09500/F14J9_16 [Source:UniProtKB/TrEMBL;Acc:O80533]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.