Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G09490.1 | Thale cress | golgi | 77.24 | 88.51 |
| CDX94966 | Canola | golgi, mitochondrion, peroxisome, plastid | 69.38 | 79.5 |
| Bra020021.1-P | Field mustard | golgi | 68.83 | 78.88 |
| CDY64747 | Canola | extracellular, golgi, mitochondrion, plastid | 69.11 | 78.7 |
| CDX94965 | Canola | golgi | 69.11 | 78.46 |
| Bra020020.1-P | Field mustard | extracellular, golgi | 68.29 | 78.26 |
| Bra020019.1-P | Field mustard | extracellular, golgi | 68.02 | 76.99 |
| CDX94967 | Canola | plasma membrane | 66.12 | 75.78 |
| CDX94968 | Canola | endoplasmic reticulum, golgi, plastid | 65.31 | 73.93 |
| CDY64748 | Canola | cytosol | 74.25 | 73.26 |
| AT1G09510.1 | Thale cress | cytosol, plastid, vacuole | 59.89 | 68.63 |
| AT1G09500.1 | Thale cress | endoplasmic reticulum | 60.16 | 68.31 |
| AT1G66800.1 | Thale cress | peroxisome, plasma membrane, plastid | 58.81 | 68.03 |
| TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 36.04 | 61.01 |
| Solyc01g087640.2.1 | Tomato | cytosol | 49.59 | 55.79 |
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 48.78 | 55.05 |
| AT5G19440.1 | Thale cress | plastid | 48.51 | 54.91 |
| AT1G51410.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 47.97 | 54.46 |
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 48.24 | 54.43 |
| GSMUA_Achr8P24060_001 | Banana | plastid | 46.88 | 53.56 |
| GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 46.61 | 53.25 |
| GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 46.88 | 52.74 |
| TraesCS5D01G540800.1 | Wheat | plastid | 46.88 | 52.42 |
| TraesCS4A01G331900.2 | Wheat | golgi, unclear | 46.88 | 52.42 |
| TraesCS5B01G547200.1 | Wheat | unclear | 46.61 | 52.12 |
| Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 47.43 | 52.08 |
| TraesCS5D01G541100.1 | Wheat | golgi | 46.07 | 51.52 |
| TraesCS5B01G547000.1 | Wheat | golgi | 46.07 | 51.52 |
| GSMUA_Achr8P24040_001 | Banana | plastid | 44.99 | 51.39 |
| KXG30065 | Sorghum | plastid | 46.34 | 51.2 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 44.99 | 48.97 |
| HORVU5Hr1G122150.1 | Barley | plastid | 47.7 | 48.89 |
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 46.34 | 47.37 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 46.88 | 46.51 |
| Zm00001d015956_P002 | Maize | plastid | 46.34 | 44.65 |
| AT1G15950.1 | Thale cress | cytosol | 40.92 | 43.9 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 39.3 | 43.67 |
| TraesCS5B01G546700.1 | Wheat | peroxisome, plastid | 26.56 | 43.36 |
| AT4G35420.1 | Thale cress | extracellular | 36.86 | 41.72 |
| AT5G58490.1 | Thale cress | cytosol | 36.31 | 41.36 |
| AT1G68540.1 | Thale cress | cytosol | 31.71 | 36.45 |
| AT2G02400.1 | Thale cress | cytosol | 31.17 | 36.16 |
| AT1G25460.1 | Thale cress | cytosol, plastid | 30.35 | 35.11 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:837471 | ProteinID:AAC33208.1 | ProteinID:AEE28448.1 | ProteinID:ANM59207.1 |
| ArrayExpress:AT1G09480 | EnsemblPlantsGene:AT1G09480 | RefSeq:AT1G09480 | TAIR:AT1G09480 | RefSeq:AT1G09480-TAIR-G | EnsemblPlants:AT1G09480.1 |
| TAIR:AT1G09480.1 | Unigene:At.51537 | InterPro:Epimerase_deHydtase | UniProt:F4I0Z5 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004022 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0050662 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001321584.1 | RefSeq:NP_172419.1 | ProteinID:OAP14804.1 | PFAM:PF01370 |
| PO:PO:0000293 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF492 | SUPFAM:SSF51735 | UniParc:UPI0000162CE4 | : |
Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
Coordinates
chr1:+:3057975..3060757
Molecular Weight (calculated)
41280.2 Da
IEP (calculated)
4.911
GRAVY (calculated)
0.025
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHEMAYKVC VEKVKSLGIE FTTPIEETLR DTIVSLMEDY KERSKEIMNG GGKLVCVTGA SGYIASWIVK LLLLRGYTVK ATVRDLTDRK KTEHLLALDG
101: AKERLKLFKA DLLEESSFEQ AIEGCDAVFH TASPVFFTVK DPQTELIDPA LKGTMNVLNT CKETPSVRRV ILTSSTAAVL FRQPPVEASD VVDETFFSDP
201: SLCRETKNWY PLSKILAENA AWEFAKDNGI DMVVLNPGFI FGPLLQPTLN FSVELIVDFI NGKNPFNSRF YRFVDVRDVA LAHIKALETP SANGRYIIDG
301: PIMSVSDIID ILRELLPDLC IADTNEESVM NEMLCKVCVE KVKNLGVEFT PMKSSLRDTI VSLKEKCLL
101: AKERLKLFKA DLLEESSFEQ AIEGCDAVFH TASPVFFTVK DPQTELIDPA LKGTMNVLNT CKETPSVRRV ILTSSTAAVL FRQPPVEASD VVDETFFSDP
201: SLCRETKNWY PLSKILAENA AWEFAKDNGI DMVVLNPGFI FGPLLQPTLN FSVELIVDFI NGKNPFNSRF YRFVDVRDVA LAHIKALETP SANGRYIIDG
301: PIMSVSDIID ILRELLPDLC IADTNEESVM NEMLCKVCVE KVKNLGVEFT PMKSSLRDTI VSLKEKCLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.