CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020020.1-P	Field mustard	extracellular, golgi	93.79	93.79
CDX94968	Canola	endoplasmic reticulum, golgi, plastid	87.27	86.2
CDX94965	Canola	golgi	84.78	84.0
CDY64747	Canola	extracellular, golgi, mitochondrion, plastid	83.54	83.02
CDX94966	Canola	golgi, mitochondrion, peroxisome, plastid	81.99	81.99
AT1G09490.1	Thale cress	golgi	75.16	75.16
CDY64748	Canola	cytosol	83.23	71.66
AT1G09480.1	Thale cress	cytosol	75.78	66.12
CDY68009	Canola	cytosol, endoplasmic reticulum, golgi	65.84	65.84
CDY72415	Canola	cytosol, endoplasmic reticulum, peroxisome	64.6	64.0
CDY45844	Canola	cytosol, golgi, peroxisome	63.66	63.08
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	40.99	60.55
GSMUA_Achr8P24060_001	Banana	plastid	54.66	54.49
CDY14000	Canola	cytosol	54.35	53.68
GSMUA_Achr8P24070_001	Banana	golgi, plastid	53.73	53.56
Solyc01g087640.2.1	Tomato	cytosol	54.04	53.05
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	53.73	52.91
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	53.73	52.91
GSMUA_Achr8P24040_001	Banana	plastid	52.8	52.63
CDY03618	Canola	cytosol	53.11	52.62
CDY65726	Canola	cytosol	53.11	52.62
CDY22576	Canola	cytosol	52.8	52.31
CDY43911	Canola	cytosol	52.8	52.31
CDX92530	Canola	cytosol	53.42	52.12
TraesCS4A01G331900.2	Wheat	golgi, unclear	53.11	51.82
TraesCS5D01G540800.1	Wheat	plastid	52.8	51.52
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	52.17	51.22
TraesCS5B01G547200.1	Wheat	unclear	52.17	50.91
TraesCS5B01G547000.1	Wheat	golgi	51.86	50.61
TraesCS5D01G541100.1	Wheat	golgi	51.86	50.61
HORVU5Hr1G122150.1	Barley	plastid	54.66	48.89
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	50.93	48.81
KXG30065	Sorghum	plastid	50.0	48.2
TraesCS4D01G343400.1	Wheat	cytosol	49.38	46.9
CDY35052	Canola	cytosol	39.44	46.01
TraesCS5A01G517000.1	Wheat	mitochondrion	51.24	45.71
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	31.06	44.25
HORVU4Hr1G085100.1	Barley	cytosol	50.0	43.28
Zm00001d015956_P002	Maize	plastid	51.24	43.08
CDX81743	Canola	cytosol	45.34	42.94
CDX87345	Canola	cytosol	44.1	42.77
CDY39941	Canola	cytosol	44.1	42.77
CDY63972	Canola	cytosol	43.79	42.6
CDY33365	Canola	cytosol	45.34	42.57
CDY64860	Canola	cytosol	43.48	42.3
CDY52857	Canola	cytosol	45.03	42.27
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	41.93	41.8
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	41.93	41.8
CDY24810	Canola	cytosol	40.99	41.64
CDX75502	Canola	cytosol, extracellular, plastid	40.68	41.07
CDX69139	Canola	cytosol, extracellular, plastid	40.37	40.75
CDY41656	Canola	cytosol, plastid, vacuole	39.13	39.75
CDX69634	Canola	cytosol	39.13	39.25
CDY38590	Canola	cytosol	38.82	38.94
CDX96012	Canola	cytosol, nucleus, peroxisome	38.82	38.94
CDY09372	Canola	cytosol	36.02	36.14
CDY42105	Canola	cytosol, plastid	34.47	34.58
CDY15830	Canola	cytosol	34.47	34.58
CDX84989	Canola	cytosol	34.47	34.58
CDX84988	Canola	cytosol	32.3	34.1
CDY42108	Canola	cytosol	20.5	28.09

Protein Annotations

EnsemblPlants:CDX94967	EnsemblPlantsGene:GSBRNA2T00100456001	Gene3D:3.40.50.720	GO:A0A078E1F9	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF492
PFAM:PF01370	ProteinID:CDX94967	ProteinID:CDX94967.1	SUPFAM:SSF51735	UniParc:UPI0004EE2BBE	MapMan:35.1

Description

BnaC05g07040D

Coordinates

chrLK031886:-:469800..471495

Molecular Weight (calculated)

35462.9 Da

IEP (calculated)

5.233

GRAVY (calculated)

0.034

Length

322 amino acids

Sequence
(BLAST)

001: MNGGGQVVCV TGASGYIASW IVKLLLLRGY TVRATVQNPT DTAETEHLLA LEGAKERLKL FKADLLEDCS FEQAIEGCDA VFHTASPVKF IVTDPQTELI
101: DPAVKGTLNV LSTCKKTSSV KRVIVTSSTA AVLVRQPPLE PNDVVDETFF SDSNVCMERK LWYPLSKTLA ENVAWQFAKD NRMDMVVINP GFIIGPLLQP
201: TLNFSVEIIV DIVKGKNPFN CRYYSFVDVR DVALAHVKAL ESPSANGRYI ISGQSVTINH IKETMHELFP NLCIDDPNGE GEMEGINCKM CVDKVKNLGV
301: EFTPLKSSLG DTIISLKEKY LL

Best Arabidopsis Sequence Match ( AT1G09480.1 )
(BLAST)

001: MMHEMAYKVC VEKVKSLGIE FTTPIEETLR DTIVSLMEDY KERSKEIMNG GGKLVCVTGA SGYIASWIVK LLLLRGYTVK ATVRDLTDRK KTEHLLALDG
101: AKERLKLFKA DLLEESSFEQ AIEGCDAVFH TASPVFFTVK DPQTELIDPA LKGTMNVLNT CKETPSVRRV ILTSSTAAVL FRQPPVEASD VVDETFFSDP
201: SLCRETKNWY PLSKILAENA AWEFAKDNGI DMVVLNPGFI FGPLLQPTLN FSVELIVDFI NGKNPFNSRF YRFVDVRDVA LAHIKALETP SANGRYIIDG
301: PIMSVSDIID ILRELLPDLC IADTNEESVM NEMLCKVCVE KVKNLGVEFT PMKSSLRDTI VSLKEKCLL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.