Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42108 | Canola | cytosol | 63.28 | 82.13 |
| CDX84989 | Canola | cytosol | 81.97 | 77.88 |
| CDY42105 | Canola | cytosol, plastid | 81.97 | 77.88 |
| AT1G25460.1 | Thale cress | cytosol, plastid | 77.7 | 74.29 |
| CDX69634 | Canola | cytosol | 66.89 | 63.55 |
| CDY38590 | Canola | cytosol | 66.56 | 63.24 |
| CDX96012 | Canola | cytosol, nucleus, peroxisome | 66.56 | 63.24 |
| Solyc01g068080.2.1 | Tomato | cytosol, extracellular, plastid | 59.67 | 56.88 |
| PGSC0003DMT400013318 | Potato | cytosol, extracellular, plastid | 59.02 | 56.25 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 58.03 | 55.31 |
| KRH75363 | Soybean | cytosol | 57.7 | 55.17 |
| KRH49476 | Soybean | cytosol | 56.39 | 53.92 |
| GSMUA_Achr6P09630_001 | Banana | cytosol | 55.08 | 52.5 |
| EES02561 | Sorghum | cytosol | 52.79 | 49.54 |
| TraesCS3D01G033300.1 | Wheat | cytosol | 51.48 | 47.72 |
| TraesCS3B01G036600.1 | Wheat | cytosol | 51.48 | 47.72 |
| TraesCS3A01G046700.1 | Wheat | cytosol | 51.48 | 47.72 |
| Os01t0127500-01 | Rice | cytosol | 51.15 | 46.29 |
| HORVU3Hr1G004270.1 | Barley | mitochondrion | 33.11 | 42.08 |
| CDY24810 | Canola | cytosol | 42.62 | 41.01 |
| CDY41656 | Canola | cytosol, plastid, vacuole | 42.62 | 41.01 |
| CDX75502 | Canola | cytosol, extracellular, plastid | 42.62 | 40.75 |
| CDX69139 | Canola | cytosol, extracellular, plastid | 42.3 | 40.44 |
| CDY14000 | Canola | cytosol | 37.05 | 34.66 |
| CDY35052 | Canola | cytosol | 31.15 | 34.42 |
| CDX92530 | Canola | cytosol | 36.72 | 33.94 |
| CDY43911 | Canola | cytosol | 35.74 | 33.54 |
| CDY22576 | Canola | cytosol | 35.41 | 33.23 |
| CDY65726 | Canola | cytosol | 34.75 | 32.62 |
| CDY03618 | Canola | cytosol | 34.75 | 32.62 |
| CDX94967 | Canola | plasma membrane | 34.1 | 32.3 |
| CDX81743 | Canola | cytosol | 35.74 | 32.06 |
| CDY52857 | Canola | cytosol | 35.74 | 31.78 |
| CDY33365 | Canola | cytosol | 35.41 | 31.49 |
| CDY64747 | Canola | extracellular, golgi, mitochondrion, plastid | 33.44 | 31.48 |
| CDY68009 | Canola | cytosol, endoplasmic reticulum, golgi | 33.11 | 31.37 |
| CDY63972 | Canola | cytosol | 33.77 | 31.12 |
| CDX94965 | Canola | golgi | 33.11 | 31.08 |
| CDX87345 | Canola | cytosol | 33.77 | 31.02 |
| CDY39941 | Canola | cytosol | 33.77 | 31.02 |
| CDX94968 | Canola | endoplasmic reticulum, golgi, plastid | 33.11 | 30.98 |
| CDY72415 | Canola | cytosol, endoplasmic reticulum, peroxisome | 32.79 | 30.77 |
| CDY57397 | Canola | cytosol, endoplasmic reticulum, peroxisome | 32.46 | 30.65 |
| CDY32979 | Canola | cytosol, endoplasmic reticulum, peroxisome | 32.46 | 30.65 |
| CDY64860 | Canola | cytosol | 33.11 | 30.51 |
| CDY45844 | Canola | cytosol, golgi, peroxisome | 32.46 | 30.46 |
| CDX94966 | Canola | golgi, mitochondrion, peroxisome, plastid | 32.13 | 30.43 |
| CDY15830 | Canola | cytosol | 30.16 | 28.66 |
| CDY09372 | Canola | cytosol | 30.16 | 28.66 |
| CDY64748 | Canola | cytosol | 33.44 | 27.27 |
Protein Annotations
| EnsemblPlants:CDX84988 | EnsemblPlantsGene:GSBRNA2T00142398001 | Gene3D:3.40.50.720 | GO:A0A078DCF7 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF503 |
| PFAM:PF01370 | ProteinID:CDX84988 | ProteinID:CDX84988.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EF0327 |
| MapMan:21.8.1.5 | : | : | : | : | : |
Description
BnaC05g20670D
Coordinates
chrLK031839:+:1229401..1231187
Molecular Weight (calculated)
34102.7 Da
IEP (calculated)
5.436
GRAVY (calculated)
-0.125
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEYLVTGGT SFIASHVVKA LLDLGYFVRT TVRDSSDEEN VRFLWELKGA KERLKIFEAD LTVDGSFDDA VKGVDGVFHI ASTISVCMDD NDLDLLADRD
101: IYGIRNLMNS CEKSRNTVRR IVLTSSSTSV RYSYDATKAS PLKESHWSDL EYCRSFRIWY GYAKSLVEKE SWLIAAEKNL NLVVVIPSFC IGPILSPKPT
201: SSPSIFLSII KGVHGEYQNF RGGFVHIDDV AAAQILAMEE PKASGRIICS SSMLKPKYPC GSEEERDMPH SLDTRKIHEL GFGSFNSLAE MFDDCIKCFQ
301: EKGLL
101: IYGIRNLMNS CEKSRNTVRR IVLTSSSTSV RYSYDATKAS PLKESHWSDL EYCRSFRIWY GYAKSLVEKE SWLIAAEKNL NLVVVIPSFC IGPILSPKPT
201: SSPSIFLSII KGVHGEYQNF RGGFVHIDDV AAAQILAMEE PKASGRIICS SSMLKPKYPC GSEEERDMPH SLDTRKIHEL GFGSFNSLAE MFDDCIKCFQ
301: EKGLL
001: MAEYLVTGGT SFIASHVIKS LLEFGHYVRT TVRDSDEEKV GFLWDLKGAK ERLKIFEADL TIEGSFDEAV NGVDGVFHIA SRVSVRLDNN NLDKFDPNIS
101: GTMNVMNSCA KSRNTVKRIV LTSSSTAIRY RFDATQVSPL NESHWTDLEY CKHFKIWYAY KKTLGEKEAW RIAADKKLNL VVVIPSFCIG PILSPKPTSS
201: PLIFLSIIKG TRGTYPNFRG GFVHIDDVVA AQILAMEEPK ASGRILCSSS VAHWSEIIEM LRIKYPLYPF ETKCGSEEGK DMPHSLDTTK IHELGFASFK
301: SLTEMFDDCI KCFQDKGLL
101: GTMNVMNSCA KSRNTVKRIV LTSSSTAIRY RFDATQVSPL NESHWTDLEY CKHFKIWYAY KKTLGEKEAW RIAADKKLNL VVVIPSFCIG PILSPKPTSS
201: PLIFLSIIKG TRGTYPNFRG GFVHIDDVVA AQILAMEEPK ASGRILCSSS VAHWSEIIEM LRIKYPLYPF ETKCGSEEGK DMPHSLDTTK IHELGFASFK
301: SLTEMFDDCI KCFQDKGLL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G25460]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.