Factsheet for PGSC0003DMT400013318

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	97.81	97.81
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	75.31	75.31
KRH75363	Soybean	cytosol	73.44	73.67
Bra008822.1-P	Field mustard	cytosol	61.88	72.0
KRH49476	Soybean	cytosol	70.62	70.85
CDX69634	Canola	cytosol	70.94	70.72
CDY38590	Canola	cytosol	70.94	70.72
CDX96012	Canola	cytosol, nucleus, peroxisome	70.31	70.09
AT1G68540.1	Thale cress	cytosol	70.0	69.78
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	70.0	69.78
GSMUA_Achr6P09630_001	Banana	cytosol	64.69	64.69
CDY42105	Canola	cytosol, plastid	62.81	62.62
AT1G25460.1	Thale cress	cytosol, plastid	61.88	62.07
CDX84989	Canola	cytosol	62.19	61.99
EES02561	Sorghum	cytosol	61.25	60.31
CDX84988	Canola	cytosol	56.25	59.02
TraesCS3B01G036600.1	Wheat	cytosol	60.31	58.66
TraesCS3D01G033300.1	Wheat	cytosol	60.0	58.36
TraesCS3A01G046700.1	Wheat	cytosol	59.38	57.75
Bra024747.1-P	Field mustard	extracellular	42.19	57.2
Os01t0127500-01	Rice	cytosol	58.75	55.79
CDY42108	Canola	cytosol	40.94	55.74
Bra024744.1-P	Field mustard	cytosol	62.81	55.37
HORVU3Hr1G004270.1	Barley	mitochondrion	37.81	50.42
PGSC0003DMT400065107	Potato	cytosol	47.81	45.67
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	43.44	41.87
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	41.25	39.76
PGSC0003DMT400065273	Potato	cytosol	35.94	35.49
PGSC0003DMT400046912	Potato	cytosol, endoplasmic reticulum, plastid	18.44	28.23

Protein Annotations

EnsemblPlants:PGSC0003DMT400013318	EnsemblPlantsGene:PGSC0003DMG400005197	EntrezGene:102588244	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF503
PFAM:PF01370	PGSC:PGSC0003DMG400005197	RefSeq:XP_006349152.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000294B2F9
UniProt:M1A2N5	MapMan:21.8.1.5	:	:	:	:

Description

Cinnamoyl-CoA reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400005197]

Coordinates

chr1:-:63254446..63257869

Molecular Weight (calculated)

35704.9 Da

IEP (calculated)

6.505

GRAVY (calculated)

-0.214

Length

320 amino acids

Sequence
(BLAST)

001: MPEYCVTGGT GFIAAYLIKA LLLKGHIVRT TVRDPDNAEK VGFLWELDGA KERLKIMKAD LLVEGSFDDA IRGVDGVFHT ASPVLVPYDD NIQKTLIDPC
101: VNGTLNVLNS CKKSSTLKRL VLTSSCSSIR YREDAQQISP LNESHWSDLQ YCQKYNLWYA YAKTKAEKEA WRVAEECGID LVVVNPSFVV GPLLAPQPTS
201: TLQIILGTVK GMIGEYANKR LGFVHIEDVV GAHILVMEEQ KASGRYICSN SVRHMSQIND LLRTKYPSYP HENKCGNQQG EDIPHSMDTS KITQLGLPPL
301: KSLNEMFDDC IQSFQEKGFL

Best Arabidopsis Sequence Match ( AT1G68540.1 )
(BLAST)

001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPRDEEK VGFLWEFQGA KQRLKILQAD LTVEGSFDEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L

Arabidopsis Description

TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.