Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024747.1-P | Field mustard | extracellular | 89.79 | 89.41 |
| CDX84988 | Canola | cytosol | 82.13 | 63.28 |
| CDY42105 | Canola | cytosol, plastid | 82.55 | 60.44 |
| CDX84989 | Canola | cytosol | 82.13 | 60.12 |
| AT1G25460.1 | Thale cress | cytosol, plastid | 80.0 | 58.93 |
| CDX69634 | Canola | cytosol | 67.66 | 49.53 |
| CDY38590 | Canola | cytosol | 67.66 | 49.53 |
| CDX96012 | Canola | cytosol, nucleus, peroxisome | 66.81 | 48.91 |
| HORVU3Hr1G004270.1 | Barley | mitochondrion | 43.4 | 42.5 |
| KRH75363 | Soybean | cytosol | 57.45 | 42.32 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 57.45 | 42.19 |
| Solyc01g068080.2.1 | Tomato | cytosol, extracellular, plastid | 56.6 | 41.56 |
| KRH49476 | Soybean | cytosol | 55.74 | 41.07 |
| PGSC0003DMT400013318 | Potato | cytosol, extracellular, plastid | 55.74 | 40.94 |
| GSMUA_Achr6P09630_001 | Banana | cytosol | 53.62 | 39.38 |
| EES02561 | Sorghum | cytosol | 50.64 | 36.62 |
| TraesCS3B01G036600.1 | Wheat | cytosol | 48.94 | 34.95 |
| TraesCS3A01G046700.1 | Wheat | cytosol | 48.94 | 34.95 |
| TraesCS3D01G033300.1 | Wheat | cytosol | 47.66 | 34.04 |
| Os01t0127500-01 | Rice | cytosol | 48.09 | 33.53 |
| CDX69139 | Canola | cytosol, extracellular, plastid | 39.57 | 29.15 |
| CDX75502 | Canola | cytosol, extracellular, plastid | 39.57 | 29.15 |
| CDY41656 | Canola | cytosol, plastid, vacuole | 39.15 | 29.02 |
| CDY24810 | Canola | cytosol | 38.72 | 28.71 |
| CDY22576 | Canola | cytosol | 33.19 | 24.0 |
| CDY43911 | Canola | cytosol | 33.19 | 24.0 |
| CDY65726 | Canola | cytosol | 32.34 | 23.38 |
| CDY03618 | Canola | cytosol | 32.34 | 23.38 |
| CDY14000 | Canola | cytosol | 32.34 | 23.31 |
| CDY35052 | Canola | cytosol | 26.81 | 22.83 |
| CDX92530 | Canola | cytosol | 31.91 | 22.73 |
| CDX81743 | Canola | cytosol | 31.91 | 22.06 |
| CDY33365 | Canola | cytosol | 31.91 | 21.87 |
| CDY52857 | Canola | cytosol | 31.91 | 21.87 |
| CDY32979 | Canola | cytosol, endoplasmic reticulum, peroxisome | 29.79 | 21.67 |
| CDY57397 | Canola | cytosol, endoplasmic reticulum, peroxisome | 29.36 | 21.36 |
| CDY64747 | Canola | extracellular, golgi, mitochondrion, plastid | 28.51 | 20.68 |
| CDY63972 | Canola | cytosol | 28.94 | 20.54 |
| CDY68009 | Canola | cytosol, endoplasmic reticulum, golgi | 28.09 | 20.5 |
| CDX94967 | Canola | plasma membrane | 28.09 | 20.5 |
| CDX87345 | Canola | cytosol | 28.94 | 20.48 |
| CDY39941 | Canola | cytosol | 28.94 | 20.48 |
| CDY64860 | Canola | cytosol | 28.51 | 20.24 |
| CDX94966 | Canola | golgi, mitochondrion, peroxisome, plastid | 27.23 | 19.88 |
| CDY45844 | Canola | cytosol, golgi, peroxisome | 27.23 | 19.69 |
| CDY72415 | Canola | cytosol, endoplasmic reticulum, peroxisome | 26.81 | 19.38 |
| CDX94965 | Canola | golgi | 26.81 | 19.38 |
| CDX94968 | Canola | endoplasmic reticulum, golgi, plastid | 26.81 | 19.33 |
| CDY15830 | Canola | cytosol | 26.38 | 19.31 |
| CDY09372 | Canola | cytosol | 26.38 | 19.31 |
| CDY64748 | Canola | cytosol | 27.66 | 17.38 |
Protein Annotations
| EnsemblPlants:CDY42108 | EnsemblPlantsGene:GSBRNA2T00074278001 | Gene3D:3.40.50.720 | GO:A0A078HZE9 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF503 |
| PFAM:PF01370 | ProteinID:CDY42108 | ProteinID:CDY42108.1 | SUPFAM:SSF51735 | UniParc:UPI0004EDDFED | UniProt:A0A078HZE9 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA09g28520DBnaA09g28520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZE9]
Coordinates
chrLK032515:-:67809..79323
Molecular Weight (calculated)
26614.2 Da
IEP (calculated)
8.750
GRAVY (calculated)
-0.206
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MQMYSFLEKL ADRDIYGTRN LMNSCEKSRN TVKRIVLTSS STSVRYSYDA TKASPLKGSH WSDLEYFRSF SIWYGYAKTL VEKEAWLIAA EKNLNLVVVI
101: PSFCIGPILS PKPTSSPSIF LSIIKGVHGE YPNFRGGFVH IDDVAAAQIL AMKEPKASGR IICSSSVAHW SEIIEMLKPK YPLYPFETKC GSEEGRDMPH
201: SLDTRKIHEL GFRSFKSLPE MFDDCIKCFK DKGLL
101: PSFCIGPILS PKPTSSPSIF LSIIKGVHGE YPNFRGGFVH IDDVAAAQIL AMKEPKASGR IICSSSVAHW SEIIEMLKPK YPLYPFETKC GSEEGRDMPH
201: SLDTRKIHEL GFRSFKSLPE MFDDCIKCFK DKGLL
001: MAEYLVTGGT SFIASHVIKS LLEFGHYVRT TVRDSDEEKV GFLWDLKGAK ERLKIFEADL TIEGSFDEAV NGVDGVFHIA SRVSVRLDNN NLDKFDPNIS
101: GTMNVMNSCA KSRNTVKRIV LTSSSTAIRY RFDATQVSPL NESHWTDLEY CKHFKIWYAY KKTLGEKEAW RIAADKKLNL VVVIPSFCIG PILSPKPTSS
201: PLIFLSIIKG TRGTYPNFRG GFVHIDDVVA AQILAMEEPK ASGRILCSSS VAHWSEIIEM LRIKYPLYPF ETKCGSEEGK DMPHSLDTTK IHELGFASFK
301: SLTEMFDDCI KCFQDKGLL
101: GTMNVMNSCA KSRNTVKRIV LTSSSTAIRY RFDATQVSPL NESHWTDLEY CKHFKIWYAY KKTLGEKEAW RIAADKKLNL VVVIPSFCIG PILSPKPTSS
201: PLIFLSIIKG TRGTYPNFRG GFVHIDDVVA AQILAMEEPK ASGRILCSSS VAHWSEIIEM LRIKYPLYPF ETKCGSEEGK DMPHSLDTTK IHELGFASFK
301: SLTEMFDDCI KCFQDKGLL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G25460]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.