Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G036600.1 | Wheat | cytosol | 98.48 | 98.48 |
| TraesCS3D01G033300.1 | Wheat | cytosol | 98.18 | 98.18 |
| HORVU3Hr1G004270.1 | Barley | mitochondrion | 63.22 | 86.67 |
| EES02561 | Sorghum | cytosol | 82.07 | 83.08 |
| Os01t0127500-01 | Rice | cytosol | 77.51 | 75.67 |
| KRH75363 | Soybean | cytosol | 61.4 | 63.32 |
| GSMUA_Achr6P09630_001 | Banana | cytosol | 61.4 | 63.12 |
| Bra008822.1-P | Field mustard | cytosol | 52.58 | 62.91 |
| Bra004316.1-P | Field mustard | cytosol, nucleus, peroxisome | 60.49 | 61.99 |
| CDX69634 | Canola | cytosol | 60.49 | 61.99 |
| KRH49476 | Soybean | cytosol | 59.88 | 61.76 |
| AT1G68540.1 | Thale cress | cytosol | 60.18 | 61.68 |
| CDY38590 | Canola | cytosol | 60.18 | 61.68 |
| CDX96012 | Canola | cytosol, nucleus, peroxisome | 60.18 | 61.68 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 58.97 | 60.62 |
| Solyc01g068080.2.1 | Tomato | cytosol, extracellular, plastid | 58.05 | 59.69 |
| PGSC0003DMT400013318 | Potato | cytosol, extracellular, plastid | 57.75 | 59.38 |
| CDY42105 | Canola | cytosol, plastid | 56.53 | 57.94 |
| CDX84989 | Canola | cytosol | 55.93 | 57.32 |
| AT1G25460.1 | Thale cress | cytosol, plastid | 54.41 | 56.11 |
| Bra024747.1-P | Field mustard | extracellular | 37.08 | 51.69 |
| CDX84988 | Canola | cytosol | 47.72 | 51.48 |
| Bra024744.1-P | Field mustard | cytosol | 56.53 | 51.24 |
| CDY42108 | Canola | cytosol | 34.95 | 48.94 |
| TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 29.18 | 44.04 |
| TraesCS5A01G271200.1 | Wheat | mitochondrion | 44.07 | 41.67 |
| TraesCS5A01G061700.1 | Wheat | cytosol | 40.73 | 39.53 |
| TraesCS4A01G331900.2 | Wheat | golgi, unclear | 39.21 | 39.09 |
| TraesCS5A01G473600.1 | Wheat | cytosol | 39.21 | 39.09 |
| TraesCS7A01G149000.1 | Wheat | cytosol | 40.73 | 38.84 |
| TraesCS5A01G225100.3 | Wheat | cytosol, plastid | 41.03 | 38.79 |
| TraesCS5A01G061600.1 | Wheat | cytosol, mitochondrion, peroxisome | 39.51 | 38.69 |
| TraesCS6A01G381400.1 | Wheat | cytosol | 38.6 | 36.81 |
| TraesCS5A01G410400.1 | Wheat | cytosol | 37.69 | 36.69 |
| TraesCS7A01G250100.1 | Wheat | cytosol, mitochondrion, plastid | 41.64 | 36.44 |
| TraesCS6A01G380800.1 | Wheat | cytosol | 37.39 | 36.18 |
| TraesCS5A01G410100.1 | Wheat | cytosol | 36.78 | 36.12 |
| TraesCS3A01G348600.1 | Wheat | cytosol | 35.87 | 35.98 |
| TraesCS6A01G381100.1 | Wheat | cytosol | 30.4 | 35.84 |
| TraesCS5A01G163400.1 | Wheat | cytosol | 38.6 | 35.57 |
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 37.39 | 34.07 |
| TraesCS6A01G380900.1 | Wheat | cytosol | 37.99 | 32.55 |
| TraesCS6A01G381700.1 | Wheat | golgi, mitochondrion | 36.47 | 31.83 |
| TraesCS5A01G061800.1 | Wheat | cytosol | 26.75 | 31.54 |
| TraesCS6A01G147300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 37.39 | 28.87 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G046700.1 | EnsemblPlantsGene:TraesCS3A01G046700 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF503 | PFAM:PF01370 |
| SEG:seg | SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:21.8.1.5 | : | : |
Description
No Description!
Coordinates
chr3A:+:24798575..24799634
Molecular Weight (calculated)
35669.6 Da
IEP (calculated)
6.442
GRAVY (calculated)
-0.047
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEYCVTGGT GFIASHLIRA LLAAGHTVRA TVRDPSDEAK VGFLWDLEGA DERLQLLRAD LLVEGSFDAA VSGVDGVFHA ASPVVVSYED GKDAQEKLVD
101: PIVKGAGNVL RSCARAAVPP RRVVFTSSCS CVRYRHHHVH GGAPPTLNES HWSDADYCRT YGLWYAYAKT VAEKEAWRLA TEHGLDLVVV NPSFVIGPVL
201: GRAAPTSTAL VVLALLKGDL GKYPNTTIGF VHVDDVVLGH VLAMEDGRAS GRLICSGDVA HWSEVLRSLR ERYPQYPIPT ECSGGKGDDR AHKMDTSKME
301: ALGFPPFLSI QQMFDDCIKS FQDKGLLLP
101: PIVKGAGNVL RSCARAAVPP RRVVFTSSCS CVRYRHHHVH GGAPPTLNES HWSDADYCRT YGLWYAYAKT VAEKEAWRLA TEHGLDLVVV NPSFVIGPVL
201: GRAAPTSTAL VVLALLKGDL GKYPNTTIGF VHVDDVVLGH VLAMEDGRAS GRLICSGDVA HWSEVLRSLR ERYPQYPIPT ECSGGKGDDR AHKMDTSKME
301: ALGFPPFLSI QQMFDDCIKS FQDKGLLLP
001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPRDEEK VGFLWEFQGA KQRLKILQAD LTVEGSFDEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L
Arabidopsis Description
TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.