Factsheet for TraesCS6A01G380800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G369500.1	Wheat	peroxisome	82.94	82.46
TraesCS6B01G420900.1	Wheat	peroxisome	79.41	78.72
HORVU6Hr1G089350.2	Barley	cytosol, peroxisome	80.29	74.18
TraesCS6A01G381400.1	Wheat	cytosol	74.12	73.04
Os02t0808800-01	Rice	cytosol	72.35	72.78
Os02t0811400-00	Rice	cytosol	72.06	72.7
EES05992	Sorghum	cytosol	70.0	71.9
TraesCS6A01G381100.1	Wheat	cytosol	57.06	69.53
OQU85928	Sorghum	cytosol	70.0	69.39
TraesCS5A01G410400.1	Wheat	cytosol	66.76	67.16
TraesCS5A01G410100.1	Wheat	cytosol	65.59	66.57
Zm00001d051938_P002	Maize	cytosol	70.29	64.59
Os02t0811800-01	Rice	cytosol	64.12	64.31
TraesCS6A01G380900.1	Wheat	cytosol	70.59	62.5
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	68.53	61.8
Os02t0811600-00	Rice	cytosol	52.35	60.75
TraesCS7A01G149000.1	Wheat	cytosol	55.29	54.49
TraesCS5A01G225100.3	Wheat	cytosol, plastid	54.71	53.45
TraesCS5A01G061700.1	Wheat	cytosol	49.12	49.26
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	48.24	48.81
TraesCS5A01G163400.1	Wheat	cytosol	49.71	47.34
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	27.65	43.12
TraesCS5A01G473600.1	Wheat	cytosol	39.71	40.91
TraesCS5A01G061800.1	Wheat	cytosol	33.53	40.86
TraesCS4A01G331900.2	Wheat	golgi, unclear	38.82	40.0
TraesCS3A01G348600.1	Wheat	cytosol	37.06	38.41
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	47.94	38.26
TraesCS3A01G046700.1	Wheat	cytosol	36.18	37.39
TraesCS5A01G271200.1	Wheat	mitochondrion	37.94	37.07
TraesCS5A01G517000.1	Wheat	mitochondrion	37.65	35.46
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	38.82	35.11

Protein Annotations

EnsemblPlants:TraesCS6A01G380800.1	EnsemblPlantsGene:TraesCS6A01G380800	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr6A:+:600950335..600954325

Molecular Weight (calculated)

37480.9 Da

IEP (calculated)

7.137

GRAVY (calculated)

-0.223

Length

340 amino acids

Sequence
(BLAST)

001: MASYSEKQAN DKGEKHHELV CVTGAGGFIG SWVVKALLLH GYRVRGTARD PADHKNAHLL TLEGAQERLA LCRADLLDRD NLCSVFSGCH GVFHVASPIS
101: ETDPELMVVA VEGTRNVINA AADAGVRRVV FTSSYGAVHM DPNRSPDTVV DETCWSDYDF CKETGNMYCC SKIMAEITAK EEAANRGLDL AVVVPSMTIG
201: PALQQKLNLG IAFINRYLTG AKKTCPNAVA GYTDVRDVAR AHVVVYERPD ARGRYLCMGA VLHRAHFLQL LRDLFPQYPI TDKREDDGKP MAKPYRFSNQ
301: RLRDLGLEFT PLKESLYDMV VSLQQHGHLP VVPGPDGPRL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.