Factsheet for HORVU6Hr1G089350.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

plastid 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G380800.1	Wheat	cytosol	74.18	80.29
TraesCS6D01G369500.1	Wheat	peroxisome	74.18	79.82
TraesCS6B01G420900.1	Wheat	peroxisome	73.64	79.01
Os02t0808800-01	Rice	cytosol	68.21	74.26
Os02t0811400-00	Rice	cytosol	67.66	73.89
EES05992	Sorghum	cytosol	63.86	71.0
OQU85928	Sorghum	cytosol	66.03	70.85
HORVU6Hr1G089340.1	Barley	mitochondrion	70.11	66.84
HORVU6Hr1G089460.2	Barley	cytosol	64.13	66.11
Os02t0811800-01	Rice	cytosol	60.87	66.08
Zm00001d051938_P002	Maize	cytosol	63.86	63.51
Os02t0811600-00	Rice	cytosol	46.47	58.36
HORVU7Hr1G022220.4	Barley	cytosol	49.73	53.82
HORVU7Hr1G030380.2	Barley	cytosol	49.73	53.67
HORVU0Hr1G013070.1	Barley	cytosol	45.11	48.4
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	49.46	48.15
HORVU6Hr1G028980.18	Barley	endoplasmic reticulum, extracellular	44.29	47.25
HORVU5Hr1G050940.1	Barley	cytosol	45.65	46.93
HORVU5Hr1G016620.2	Barley	cytosol	43.21	44.17
HORVU5Hr1G016690.3	Barley	cytosol	42.93	43.77
HORVU5Hr1G122150.1	Barley	plastid	37.77	38.61
HORVU3Hr1G088020.2	Barley	cytosol	33.15	37.31
HORVU4Hr1G085100.1	Barley	cytosol	36.68	36.29
HORVU5Hr1G112340.7	Barley	cytosol, plastid	36.68	36.0
HORVU3Hr1G004270.1	Barley	mitochondrion	19.29	29.58
HORVU5Hr1G016670.3	Barley	plastid	1.63	14.29

Protein Annotations

EnsemblPlants:HORVU6Hr1G089350.2	EnsemblPlantsGene:HORVU6Hr1G089350	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000B476B8D	UniProt:A0A287V4B2	MapMan:21.6.1.5	:

Description

No Description!

Coordinates

chrchr6H:-:569195350..569198972

Molecular Weight (calculated)

41136.7 Da

IEP (calculated)

8.204

GRAVY (calculated)

-0.161

Length

368 amino acids

Sequence
(BLAST)

001: LVSSIYVHLE IYKTKSLAVT AVTMRSYSET KANGNREKEQ QLVCVTGAGG FIGSWVVKVL LLRGYRVRGT ARDPADNKNS YLLDLEGAKE RLSVCRADLL
101: DRDNLNGVFR GCNGVFHIAS PMFNTDPELM VVAVEGTRNV IHAAADAGVR RVVFTSSYGA VHMDPNRNLD AVLDETCWSD YEFCKQTGNM YCCSKMMAEI
201: TATEEAAKRG LELSVVVPSM TIGPALQHKL RVVVPSTVHI SRYLTGAKKT CPNVVTAYVD VRDVARAHIL VYERPDARGR YLCICDVLHR AHFLQLLRDL
301: FPYYPITDKC EDDGKPMVKP YRFSNQRLRD LGLDFTPLKE SLHETVLSLQ QQGHLDLPVV PGPERARL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.