Factsheet for HORVU6Hr1G028980.18

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G136600.2	Wheat	extracellular, vacuole	91.59	91.86
EES04640	Sorghum	golgi, plastid	83.48	83.97
Os02t0180700-01	Rice	extracellular	83.19	83.43
TraesCS6B01G175600.2	Wheat	plastid	91.01	81.98
Zm00001d015513_P001	Maize	golgi, peroxisome, plastid, vacuole	81.74	81.5
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	90.14	73.0
GSMUA_Achr11P...	Banana	plastid	61.45	63.66
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	57.1	59.34
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	57.1	59.34
KRH47350	Soybean	cytosol	56.52	58.73
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	55.65	57.83
HORVU5Hr1G050940.1	Barley	cytosol	60.0	57.82
KRH09656	Soybean	cytosol	55.94	57.44
KRH44552	Soybean	cytosol	55.36	57.36
CDY35052	Canola	cytosol	45.8	57.25
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	55.07	57.23
HORVU7Hr1G022220.4	Barley	cytosol	56.23	57.06
HORVU7Hr1G030380.2	Barley	cytosol	56.23	56.89
VIT_09s0070g00240.t01	Wine grape	cytosol	55.36	56.51
KRH23636	Soybean	cytosol	55.07	56.21
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	53.62	55.72
CDY63972	Canola	cytosol	53.33	55.59
CDY64860	Canola	cytosol	53.04	55.29
Bra008438.1-P	Field mustard	cytosol	53.04	55.29
Bra035150.1-P	Field mustard	cytosol	53.04	55.12
CDX87345	Canola	cytosol	53.04	55.12
CDX81743	Canola	cytosol	54.2	55.0
Bra026090.1-P	Field mustard	cytosol	53.91	54.55
CDY52857	Canola	cytosol	54.2	54.52
Bra026737.1-P	Field mustard	cytosol	54.2	54.52
CDY39941	Canola	cytosol	52.46	54.52
CDY33365	Canola	cytosol	53.91	54.23
AT1G15950.1	Thale cress	cytosol	53.62	53.78
HORVU0Hr1G013070.1	Barley	cytosol	51.88	52.19
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	56.81	51.85
HORVU5Hr1G016690.3	Barley	cytosol	48.41	46.26
HORVU5Hr1G016620.2	Barley	cytosol	48.12	46.11
HORVU6Hr1G089460.2	Barley	cytosol	47.25	45.66
HORVU6Hr1G089350.2	Barley	cytosol, peroxisome	47.25	44.29
HORVU6Hr1G089340.1	Barley	mitochondrion	47.83	42.75
HORVU3Hr1G088020.2	Barley	cytosol	36.23	38.23
HORVU5Hr1G122150.1	Barley	plastid	38.26	36.67
HORVU4Hr1G085100.1	Barley	cytosol	37.1	34.41
HORVU5Hr1G112340.7	Barley	cytosol, plastid	37.39	34.4
HORVU3Hr1G004270.1	Barley	mitochondrion	22.32	32.08
HORVU5Hr1G016670.3	Barley	plastid	0.29	2.38

Protein Annotations

EnsemblPlants:HORVU6Hr1G028980.18	EnsemblPlantsGene:HORVU6Hr1G028980	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF432	PFAM:PF01370
SUPFAM:SSF51735	UniParc:UPI000B46845B	UniProt:A0A287TQT8	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chrchr6H:-:116994232..116996094

Molecular Weight (calculated)

37688.4 Da

IEP (calculated)

7.745

GRAVY (calculated)

-0.133

Length

345 amino acids

Sequence
(BLAST)

001: AMAAVVCVTG AGGFIGSWIV KLLLARGYAV RGTSRRADDP KNAHLWALDG AAERLTMVQV DLLDRASLRA AFHGCDGVIH TASPMHDTPE EIIEPVITGT
101: LNVVEMAAGA GVRRVVLSST IGTMYMNPHR DPDAPLDDSC WSDLDYCKQT KNWYCYAKTI AERGAWEAAR SLGLDLAVVI PVVTLGELLQ PSMNTSTKHI
201: LKYLTGEAKA YVNESHAYVH VKDAAEAHVR VLQAPNAGGR RYVCAERTLH RGELCRILAG LFPEYPIPTR CKDEVNPPKK GYKYTNQPLK DLGMKFTPVQ
301: EYLYEAVNSL QEKGFIKKAS GTKEDGNRTA TCMVALIPVS LAESV

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.