Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G225100.3 | Wheat | cytosol, plastid | 87.57 | 95.11 |
| TraesCS5D01G232400.1 | Wheat | cytosol, peroxisome, plastid | 88.1 | 94.87 |
| TraesCS5B01G223700.2 | Wheat | cytosol | 89.42 | 94.68 |
| HORVU0Hr1G013070.1 | Barley | cytosol | 82.01 | 90.38 |
| Os09t0419200-01 | Rice | cytosol | 81.48 | 86.27 |
| GSMUA_Achr5P04460_001 | Banana | cytosol, peroxisome, plastid | 69.58 | 78.27 |
| GSMUA_Achr11P... | Banana | cytosol | 68.52 | 77.31 |
| HORVU7Hr1G022220.4 | Barley | cytosol | 67.99 | 75.59 |
| HORVU7Hr1G030380.2 | Barley | cytosol | 67.72 | 75.07 |
| CDY35052 | Canola | cytosol | 54.76 | 75.0 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 66.14 | 73.96 |
| PGSC0003DMT400051049 | Potato | endoplasmic reticulum, peroxisome, plastid | 63.23 | 71.99 |
| PGSC0003DMT400073398 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 62.96 | 71.69 |
| Solyc03g116910.2.1 | Tomato | endoplasmic reticulum, peroxisome, plastid | 62.7 | 71.39 |
| CDX81743 | Canola | cytosol | 64.02 | 71.18 |
| CDY52857 | Canola | cytosol | 64.55 | 71.14 |
| Bra026737.1-P | Field mustard | cytosol | 64.55 | 71.14 |
| KRH09656 | Soybean | cytosol | 63.23 | 71.13 |
| Solyc06g068440.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 62.43 | 71.08 |
| Bra026090.1-P | Field mustard | cytosol | 63.76 | 70.67 |
| CDY33365 | Canola | cytosol | 64.02 | 70.55 |
| KRH47350 | Soybean | cytosol | 61.9 | 70.48 |
| KRH44552 | Soybean | cytosol | 61.64 | 69.97 |
| AT1G15950.1 | Thale cress | cytosol | 63.49 | 69.77 |
| CDY63972 | Canola | cytosol | 60.05 | 68.58 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 60.05 | 68.37 |
| Bra035150.1-P | Field mustard | cytosol | 60.05 | 68.37 |
| CDX87345 | Canola | cytosol | 60.05 | 68.37 |
| KRH23636 | Soybean | cytosol | 61.11 | 68.34 |
| Bra008438.1-P | Field mustard | cytosol | 59.79 | 68.28 |
| CDY64860 | Canola | cytosol | 59.79 | 68.28 |
| CDY39941 | Canola | cytosol | 59.79 | 68.07 |
| HORVU5Hr1G050940.1 | Barley | cytosol | 58.73 | 62.01 |
| HORVU6Hr1G028980.18 | Barley | endoplasmic reticulum, extracellular | 51.85 | 56.81 |
| HORVU5Hr1G016620.2 | Barley | cytosol | 52.38 | 55.0 |
| HORVU5Hr1G016690.3 | Barley | cytosol | 52.38 | 54.85 |
| HORVU6Hr1G089460.2 | Barley | cytosol | 48.41 | 51.26 |
| HORVU6Hr1G089350.2 | Barley | cytosol, peroxisome | 48.15 | 49.46 |
| HORVU6Hr1G089340.1 | Barley | mitochondrion | 49.74 | 48.7 |
| HORVU5Hr1G122150.1 | Barley | plastid | 42.59 | 44.72 |
| HORVU3Hr1G088020.2 | Barley | cytosol | 38.1 | 44.04 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 39.95 | 40.59 |
| HORVU5Hr1G112340.7 | Barley | cytosol, plastid | 38.89 | 39.2 |
| HORVU3Hr1G004270.1 | Barley | mitochondrion | 21.96 | 34.58 |
| HORVU5Hr1G016670.3 | Barley | plastid | 1.32 | 11.9 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G065330.5 | EnsemblPlantsGene:HORVU5Hr1G065330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0050662 |
| InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF404 | PFAM:PF01370 | SEG:seg |
| SUPFAM:SSF51735 | UniParc:UPI000B4762DC | UniProt:A0A287RK04 | MapMan:21.6.1.5 | : | : |
Description
No Description!
Coordinates
chrchr5H:-:499628310..499632927
Molecular Weight (calculated)
40721.6 Da
IEP (calculated)
6.180
GRAVY (calculated)
-0.068
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVVDAAAAV AQELPGHGQT VCVTGAAGYI ASWLVKLLLE RGYTVKGTVR NPGTRTIDLF VSDCDIAACG LSSGLTNVHD AADDPKNAHL KALDGAAERL
101: VLCKADLLDY DAICAAVEGC HGVFHTASPV TDDPEQMVEP AVRGTEYVID AAADAGTVRR VVFTSSIGAV TMDPNRGPDV VVDESCWSDL EFCKKTKNWY
201: CYGKAVAEQA AWEKARARGV DLVVVNPVLV VGPLLQPTVN ASAAHILKYL DGSARKYANA VQAYVDVRDV AGAHLRVFEA PQASGRYLCA ERVLHRQDVV
301: HILAKLFPEY PVPTRCSDEV NPRKQPYKMS NQKLQDLGLK FTPVNDSLYE TVKSLQEKGH LPVPRKDILA PQLDGATA
101: VLCKADLLDY DAICAAVEGC HGVFHTASPV TDDPEQMVEP AVRGTEYVID AAADAGTVRR VVFTSSIGAV TMDPNRGPDV VVDESCWSDL EFCKKTKNWY
201: CYGKAVAEQA AWEKARARGV DLVVVNPVLV VGPLLQPTVN ASAAHILKYL DGSARKYANA VQAYVDVRDV AGAHLRVFEA PQASGRYLCA ERVLHRQDVV
301: HILAKLFPEY PVPTRCSDEV NPRKQPYKMS NQKLQDLGLK FTPVNDSLYE TVKSLQEKGH LPVPRKDILA PQLDGATA
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.