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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026090.1-P Field mustard cytosol 99.64 80.65
CDY33365 Canola cytosol 98.19 79.01
CDY52857 Canola cytosol 97.1 78.13
CDX81743 Canola cytosol 96.01 77.94
AT1G15950.1 Thale cress cytosol 96.01 77.03
CDY63972 Canola cytosol 83.33 69.49
CDY64860 Canola cytosol 82.97 69.18
CDX87345 Canola cytosol 82.97 68.98
VIT_09s0070g00240.t01 Wine grape cytosol 84.06 68.64
CDY39941 Canola cytosol 82.25 68.37
PGSC0003DMT400051049 Potato endoplasmic reticulum, peroxisome, plastid 78.99 65.66
PGSC0003DMT400073398 Potato cytosol, endoplasmic reticulum, mitochondrion, plastid 78.62 65.36
Solyc06g068440.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plastid 78.26 65.06
Solyc03g116910.2.1 Tomato endoplasmic reticulum, peroxisome, plastid 76.81 63.86
KRH47350 Soybean cytosol 76.45 63.55
KRH09656 Soybean cytosol 77.17 63.39
KRH44552 Soybean cytosol 76.09 63.06
KRH23636 Soybean cytosol 76.09 62.13
GSMUA_Achr5P04460_001 Banana cytosol, peroxisome, plastid 74.64 61.31
GSMUA_Achr11P... Banana plastid 72.83 60.36
TraesCS5A01G225100.3 Wheat cytosol, plastid 75.72 60.06
TraesCS5D01G232400.1 Wheat cytosol, peroxisome, plastid 75.0 58.97
TraesCS5B01G223700.2 Wheat cytosol 76.09 58.82
HORVU7Hr1G030380.2 Barley cytosol 72.46 58.65
TraesCS7D01G150500.1 Wheat cytosol 72.46 58.65
TraesCS7D01G150600.1 Wheat cytosol 72.46 58.31
TraesCS7A01G149000.1 Wheat cytosol 72.46 57.97
HORVU7Hr1G022220.4 Barley cytosol 71.38 57.94
GSMUA_Achr11P... Banana cytosol 70.29 57.91
EER89338 Sorghum cytosol 72.46 57.8
Os09t0419200-01 Rice cytosol 74.64 57.7
Zm00001d045101_P001 Maize cytosol 69.93 56.76
Zm00001d019669_P001 Maize cytosol 69.93 56.6
Os08t0441500-01 Rice cytosol, peroxisome, plastid 73.19 55.96
OQU89100 Sorghum cytosol 69.57 55.49
EES15061 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 74.28 54.81
TraesCS5D01G073300.1 Wheat cytosol 66.67 54.76
HORVU5Hr1G065330.5 Barley cytosol, peroxisome, plastid 75.0 54.76
HORVU0Hr1G013070.1 Barley cytosol 67.39 54.23
TraesCS5A01G061600.1 Wheat cytosol, mitochondrion, peroxisome 65.94 54.17
TraesCS5B01G069600.1 Wheat cytosol, mitochondrion, peroxisome 65.94 54.17
TraesCS5B01G069500.1 Wheat cytosol 66.3 53.98
TraesCS7B01G052700.1 Wheat plastid 72.1 53.93
Zm00001d050417_P001 Maize cytosol 70.29 53.44
TraesCS5D01G073400.1 Wheat cytosol 65.58 53.39
Os09t0127300-01 Rice cytosol 67.03 53.31
TraesCS5A01G061700.1 Wheat cytosol 64.86 52.8
Os08t0277200-01 Rice plastid 65.22 52.63
TraesCS5A01G163400.1 Wheat cytosol 65.94 50.98
HORVU5Hr1G016690.3 Barley cytosol 66.67 50.97
HORVU5Hr1G050940.1 Barley cytosol 65.94 50.84
HORVU5Hr1G016620.2 Barley cytosol 66.3 50.83
TraesCS5D01G168400.1 Wheat cytosol 65.58 50.7
TraesCS7B01G052600.1 Wheat cytosol 72.1 50.64
Zm00001d032152_P001 Maize cytosol 74.28 50.25
TraesCS5B01G160700.1 Wheat cytosol 65.58 49.59
TraesCS6D01G136600.2 Wheat extracellular, vacuole 57.97 46.51
Os02t0180700-01 Rice extracellular 57.97 46.51
EES04640 Sorghum golgi, plastid 57.61 46.36
Zm00001d015513_P001 Maize golgi, peroxisome, plastid, vacuole 57.61 45.95
HORVU6Hr1G028980.18 Barley endoplasmic reticulum, extracellular 57.25 45.8
CDY14000 Canola cytosol 52.54 44.48
CDX92530 Canola cytosol 52.9 44.24
CDY43911 Canola cytosol 51.81 44.0
CDY22576 Canola cytosol 51.81 44.0
CDY65726 Canola cytosol 51.09 43.38
CDY03618 Canola cytosol 51.09 43.38
TraesCS5A01G061800.1 Wheat cytosol 43.12 42.65
TraesCS6B01G175600.2 Wheat plastid 58.33 42.04
CDY64747 Canola extracellular, golgi, mitochondrion, plastid 48.19 41.05
CDY68009 Canola cytosol, endoplasmic reticulum, golgi 47.83 40.99
CDY57397 Canola cytosol, endoplasmic reticulum, peroxisome 47.83 40.87
CDY32979 Canola cytosol, endoplasmic reticulum, peroxisome 47.46 40.56
CDX94965 Canola golgi 47.46 40.31
CDX94966 Canola golgi, mitochondrion, peroxisome, plastid 46.38 39.75
CDX94968 Canola endoplasmic reticulum, golgi, plastid 46.74 39.57
CDX94967 Canola plasma membrane 46.01 39.44
CDY72415 Canola cytosol, endoplasmic reticulum, peroxisome 46.01 39.08
CDY45844 Canola cytosol, golgi, peroxisome 45.65 38.77
TraesCS6A01G147300.1 Wheat cytosol, endoplasmic reticulum, peroxisome 58.33 37.79
CDY38590 Canola cytosol 43.48 37.38
CDX69634 Canola cytosol 43.48 37.38
CDX69139 Canola cytosol, extracellular, plastid 43.12 37.3
CDX75502 Canola cytosol, extracellular, plastid 43.12 37.3
CDY24810 Canola cytosol 42.75 37.22
CDY41656 Canola cytosol, plastid, vacuole 42.75 37.22
CDX96012 Canola cytosol, nucleus, peroxisome 43.12 37.07
CDY09372 Canola cytosol 42.03 36.14
CDY15830 Canola cytosol 42.03 36.14
CDY64748 Canola cytosol 47.46 35.03
CDY42105 Canola cytosol, plastid 39.86 34.27
CDX84989 Canola cytosol 39.49 33.96
CDX84988 Canola cytosol 34.42 31.15
CDY42108 Canola cytosol 22.83 26.81
HORVU5Hr1G016670.3 Barley plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY35052EnsemblPlantsGene:GSBRNA2T00057917001Gene3D:3.40.50.720GO:A0A078HBB8GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfncoils:CoilPANTHER:PTHR10366
PANTHER:PTHR10366:SF404PFAM:PF01370ProteinID:CDY35052ProteinID:CDY35052.1SEG:segSUPFAM:SSF51735
UniParc:UPI0004EEB714UniProt:A0A078HBB8MapMan:21.6.1.5:::
Description
BnaA06g10620DBnaA06g10620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBB8]
Coordinates
chrLK032346:+:32946..34509
Molecular Weight (calculated)
30039.1 Da
IEP (calculated)
5.194
GRAVY (calculated)
-0.048
Length
276 amino acids
Sequence
(BLAST)
001: MPLAESSPAG KTVCVTGAGG YIASWIVKLL LERGYTVKGT VRNPDDPKNT HLRELEGAKE RLILCKADLQ DYEALKTAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LEFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLFHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APTASGRYLL AESALHRGEV VEILAKLFPE YPLPTK
Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.