Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G069600.1 | Wheat | cytosol, mitochondrion, peroxisome | 95.54 | 95.54 |
| TraesCS5A01G061600.1 | Wheat | cytosol, mitochondrion, peroxisome | 93.75 | 93.75 |
| TraesCS5D01G073400.1 | Wheat | cytosol | 92.86 | 92.04 |
| HORVU5Hr1G016620.2 | Barley | cytosol | 83.93 | 78.33 |
| HORVU5Hr1G016690.3 | Barley | cytosol | 83.93 | 78.12 |
| Os08t0277200-01 | Rice | plastid | 75.6 | 74.27 |
| CDY35052 | Canola | cytosol | 54.76 | 66.67 |
| PGSC0003DMT400073398 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 63.99 | 64.76 |
| Solyc06g068440.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 63.69 | 64.46 |
| Solyc03g116910.2.1 | Tomato | endoplasmic reticulum, peroxisome, plastid | 63.1 | 63.86 |
| PGSC0003DMT400051049 | Potato | endoplasmic reticulum, peroxisome, plastid | 63.1 | 63.86 |
| KRH47350 | Soybean | cytosol | 62.8 | 63.55 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 63.69 | 63.31 |
| KRH44552 | Soybean | cytosol | 62.5 | 63.06 |
| GSMUA_Achr11P... | Banana | plastid | 62.2 | 62.76 |
| KRH09656 | Soybean | cytosol | 62.5 | 62.5 |
| TraesCS7D01G150600.1 | Wheat | cytosol | 62.8 | 61.52 |
| TraesCS7D01G150500.1 | Wheat | cytosol | 62.2 | 61.29 |
| KRH23636 | Soybean | cytosol | 61.01 | 60.65 |
| Bra026090.1-P | Field mustard | cytosol | 61.31 | 60.41 |
| CDY33365 | Canola | cytosol | 61.31 | 60.06 |
| CDX81743 | Canola | cytosol | 60.71 | 60.0 |
| CDY52857 | Canola | cytosol | 61.01 | 59.77 |
| Bra026737.1-P | Field mustard | cytosol | 61.01 | 59.77 |
| CDX87345 | Canola | cytosol | 58.63 | 59.34 |
| Bra035150.1-P | Field mustard | cytosol | 58.63 | 59.34 |
| AT1G15950.1 | Thale cress | cytosol | 60.71 | 59.3 |
| CDY64860 | Canola | cytosol | 58.33 | 59.21 |
| Bra008438.1-P | Field mustard | cytosol | 58.33 | 59.21 |
| CDY39941 | Canola | cytosol | 58.33 | 59.04 |
| CDY63972 | Canola | cytosol | 58.04 | 58.91 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 57.74 | 58.43 |
| TraesCS5D01G168400.1 | Wheat | cytosol | 61.9 | 58.26 |
| TraesCS5D01G232400.1 | Wheat | cytosol, peroxisome, plastid | 60.71 | 58.12 |
| TraesCS6D01G136600.2 | Wheat | extracellular, vacuole | 53.87 | 52.62 |
| TraesCS6D01G366200.1 | Wheat | cytosol | 51.79 | 50.43 |
| TraesCS6D01G365700.1 | Wheat | cytosol | 51.19 | 49.86 |
| TraesCS6D01G369500.1 | Wheat | peroxisome | 49.4 | 48.54 |
| TraesCS6D01G366400.1 | Wheat | cytosol | 46.13 | 46.55 |
| TraesCS6D01G365900.1 | Wheat | cytosol | 46.43 | 46.15 |
| TraesCS6D01G366000.1 | Wheat | cytosol | 51.19 | 44.68 |
| TraesCS5D01G541100.1 | Wheat | golgi | 41.37 | 42.12 |
| TraesCS5D01G540800.1 | Wheat | plastid | 40.48 | 41.21 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 41.07 | 40.71 |
| TraesCS5D01G486300.2 | Wheat | cytosol | 39.88 | 40.61 |
| TraesCS3D01G033300.1 | Wheat | cytosol | 38.69 | 39.51 |
| TraesCS7D01G248800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 38.69 | 39.51 |
| TraesCS5D01G278800.1 | Wheat | mitochondrion | 39.29 | 37.93 |
| TraesCS3D01G342200.2 | Wheat | cytosol | 38.69 | 37.9 |
| HORVU5Hr1G016670.3 | Barley | plastid | 2.38 | 19.05 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G073300.1 | EnsemblPlantsGene:TraesCS5D01G073300 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF380 | PFAM:PF01370 |
| SUPFAM:SSF51735 | TIGR:cd08958 | TMHMM:TMhelix | MapMan:21.6.1.5 | : | : |
Description
No Description!
Coordinates
chr5D:+:72589622..72590964
Molecular Weight (calculated)
36986.3 Da
IEP (calculated)
7.186
GRAVY (calculated)
-0.196
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIDRVNTAD TGRGLTVCVT GAGGFIASWL VKLLLEKGYA VHGTVRNPDD MARNVHLRAL EGATEQLTLF RVDLLDKESL VAAFQGCEGV FHTACPVTDD
101: PEKMIEPAVN GTRNVINAAA EVGGIRRVVM TSSIGSVYMD PRRSIDGEAD ETCWSDLEFC KNTKNWYCYA KTVAEQAAWE LAKERKLDLV VINPSLVLGP
201: LLQTAVNAST WHIAKYLDGS VQTYANAAQA YVHVQDVADA HTRAYETPDA HGRYLCAGRT LHRGEVCRIL AKFFPEYPVP TRCKEGTREM KKGCRFSSRR
301: IMELGVGITP ASQCLYDTVT SLQDKGILPR RHADMS
101: PEKMIEPAVN GTRNVINAAA EVGGIRRVVM TSSIGSVYMD PRRSIDGEAD ETCWSDLEFC KNTKNWYCYA KTVAEQAAWE LAKERKLDLV VINPSLVLGP
201: LLQTAVNAST WHIAKYLDGS VQTYANAAQA YVHVQDVADA HTRAYETPDA HGRYLCAGRT LHRGEVCRIL AKFFPEYPVP TRCKEGTREM KKGCRFSSRR
301: IMELGVGITP ASQCLYDTVT SLQDKGILPR RHADMS
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.