CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035150.1-P	Field mustard	cytosol	99.1	99.1
CDX87345	Canola	cytosol	99.1	99.1
CDY63972	Canola	cytosol	94.88	95.17
CDY64860	Canola	cytosol	94.88	95.17
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	92.77	92.77
CDY35052	Canola	cytosol	68.37	82.25
CDY33365	Canola	cytosol	83.13	80.47
CDX81743	Canola	cytosol	81.93	80.0
CDY52857	Canola	cytosol	82.53	79.88
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	74.7	74.7
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	72.89	72.89
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	72.59	72.59
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	72.59	72.59
VIT_09s0070g00240.t01	Wine grape	cytosol	73.8	72.49
KRH09656	Soybean	cytosol	71.08	70.24
KRH47350	Soybean	cytosol	70.18	70.18
KRH44552	Soybean	cytosol	69.88	69.67
KRH23636	Soybean	cytosol	70.18	68.93
GSMUA_Achr5P04460_001	Banana	cytosol, peroxisome, plastid	66.57	65.77
TraesCS5A01G225100.3	Wheat	cytosol, plastid	68.07	64.94
TraesCS7D01G150500.1	Wheat	cytosol	65.96	64.22
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	67.77	64.1
GSMUA_Achr11P...	Banana	plastid	63.86	63.66
HORVU7Hr1G030380.2	Barley	cytosol	65.36	63.64
TraesCS5B01G223700.2	Wheat	cytosol	68.37	63.59
GSMUA_Achr11P...	Banana	cytosol	64.16	63.58
TraesCS7A01G149000.1	Wheat	cytosol	65.96	63.48
EER89338	Sorghum	cytosol	65.96	63.29
TraesCS7D01G150600.1	Wheat	cytosol	65.06	62.97
HORVU7Hr1G022220.4	Barley	cytosol	63.86	62.35
Zm00001d045101_P001	Maize	cytosol	63.86	62.35
Zm00001d019669_P001	Maize	cytosol	63.86	62.17
OQU89100	Sorghum	cytosol	64.76	62.14
Os08t0441500-01	Rice	cytosol, peroxisome, plastid	66.57	61.22
Os09t0419200-01	Rice	cytosol	65.66	61.06
HORVU0Hr1G013070.1	Barley	cytosol	62.05	60.06
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	68.07	59.79
Os09t0127300-01	Rice	cytosol	62.35	59.65
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	67.17	59.63
HORVU5Hr1G050940.1	Barley	cytosol	62.95	58.38
TraesCS5D01G073300.1	Wheat	cytosol	59.04	58.33
TraesCS7B01G052700.1	Wheat	plastid	64.76	58.27
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	58.73	58.04
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	58.73	58.04
TraesCS5A01G163400.1	Wheat	cytosol	62.35	57.98
TraesCS5D01G073400.1	Wheat	cytosol	59.04	57.82
TraesCS5D01G168400.1	Wheat	cytosol	62.05	57.7
Os08t0277200-01	Rice	plastid	59.04	57.31
TraesCS5B01G069500.1	Wheat	cytosol	58.43	57.23
TraesCS5B01G160700.1	Wheat	cytosol	62.35	56.71
TraesCS5A01G061700.1	Wheat	cytosol	57.53	56.34
TraesCS7B01G052600.1	Wheat	cytosol	66.27	55.98
Zm00001d050417_P001	Maize	cytosol	61.14	55.92
Zm00001d032152_P001	Maize	cytosol	66.57	54.17
TraesCS6D01G136600.2	Wheat	extracellular, vacuole	55.72	53.78
Os02t0180700-01	Rice	extracellular	55.42	53.49
EES04640	Sorghum	golgi, plastid	55.12	53.35
Zm00001d015513_P001	Maize	golgi, peroxisome, plastid, vacuole	55.42	53.18
HORVU6Hr1G028980.18	Barley	endoplasmic reticulum, extracellular	54.52	52.46
HORVU5Hr1G016690.3	Barley	cytosol	55.42	50.97
HORVU5Hr1G016620.2	Barley	cytosol	55.12	50.83
TraesCS6B01G175600.2	Wheat	plastid	56.02	48.56
CDY14000	Canola	cytosol	47.29	48.16
CDX92530	Canola	cytosol	47.29	47.58
TraesCS5A01G061800.1	Wheat	cytosol	39.76	47.31
CDY22576	Canola	cytosol	45.78	46.77
CDY03618	Canola	cytosol	45.78	46.77
CDY65726	Canola	cytosol	45.78	46.77
CDY43911	Canola	cytosol	45.48	46.46
CDY72415	Canola	cytosol, endoplasmic reticulum, peroxisome	43.98	44.92
CDY68009	Canola	cytosol, endoplasmic reticulum, golgi	43.37	44.72
CDY64747	Canola	extracellular, golgi, mitochondrion, plastid	43.37	44.44
CDY45844	Canola	cytosol, golgi, peroxisome	43.37	44.31
CDX94968	Canola	endoplasmic reticulum, golgi, plastid	43.37	44.17
CDX94967	Canola	plasma membrane	42.77	44.1
CDX94966	Canola	golgi, mitochondrion, peroxisome, plastid	42.77	44.1
CDX94965	Canola	golgi	42.77	43.69
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	42.17	43.34
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	55.42	43.19
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	41.57	42.72
CDY38590	Canola	cytosol	39.76	41.12
CDX69634	Canola	cytosol	39.76	41.12
CDX96012	Canola	cytosol, nucleus, peroxisome	38.86	40.19
CDX69139	Canola	cytosol, extracellular, plastid	38.55	40.13
CDX75502	Canola	cytosol, extracellular, plastid	38.55	40.13
CDY24810	Canola	cytosol	38.25	40.06
CDY41656	Canola	cytosol, plastid, vacuole	38.25	40.06
CDY64748	Canola	cytosol	43.07	38.24
CDY09372	Canola	cytosol	36.75	38.01
CDY42105	Canola	cytosol, plastid	36.14	37.38
CDY15830	Canola	cytosol	35.84	37.07
CDX84989	Canola	cytosol	35.24	36.45
CDX84988	Canola	cytosol	31.02	33.77
CDY42108	Canola	cytosol	20.48	28.94
HORVU5Hr1G016670.3	Barley	plastid	1.2	9.52

Protein Annotations

EnsemblPlants:CDY39941	EnsemblPlantsGene:GSBRNA2T00068819001	Gene3D:3.40.50.720	GO:A0A078HQM8	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF404
PFAM:PF01370	ProteinID:CDY39941	ProteinID:CDY39941.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00021B0942
UniProt:A0A078HQM8	MapMan:21.6.1.5	:	:	:	:

Description

BnaC06g40190DBnaC06g40190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQM8]

Coordinates

chrLK032461:-:19854..21703

Molecular Weight (calculated)

36573.7 Da

IEP (calculated)

6.709

GRAVY (calculated)

-0.202

Length

332 amino acids

Sequence
(BLAST)

001: MPADGKLVCV TGAGGYIASW IVKLLLERGY TVRGTVRNPA DPKNNHLREL DGAKERLTLH SADLLDYEAL CAAIDGCDGV FHTASPMTDD PETMLEPAVN
101: GAKFVIDAAA KAEVKRVVFT SSIGAVYMNP NRHPQTIVNE DCWSDLDFCK NTKNWYCYGK MVAEQSAWET AKAKGVDLVV LNPVLVLGPP LQSAVNASLV
201: HILKYLTGSA KTYANLTQVY VDVRDVALGH VMVYESSSAS GRYILAETAL HRGEVVEILA KFFPEYPLPT KCSDDKNPRA KPYKFTTQKI KDLGLEFTPI
301: KQSLYDSVKS LQEKGHLRLP QYSNQDNVTI ES

Best Arabidopsis Sequence Match ( AT1G80820.1 )
(BLAST)

001: MLVDGKLVCV TGAGGYIASW IVKLLLERGY TVRGTVRNPT DPKNNHLREL QGAKERLTLH SADLLDYEAL CATIDGCDGV FHTASPMTDD PETMLEPAVN
101: GAKFVIDAAA KAKVKRVVFT SSIGAVYMNP NRDTQAIVDE NCWSDLDFCK NTKNWYCYGK MLAEQSAWET AKAKGVDLVV LNPVLVLGPP LQSAINASLV
201: HILKYLTGSA KTYANLTQVY VDVRDVALGH VLVYEAPSAS GRYILAETAL HRGEVVEILA KFFPEYPLPT KCSDEKNPRA KPYKFTTQKI KDLGLEFKPI
301: KQSLYESVKS LQEKGHLPLP QDSNQNEVII ES

Arabidopsis Description

CCR2Cinnamoyl-CoA reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH9]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.