CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
extracellular 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75502	Canola	cytosol, extracellular, plastid	96.55	96.55
CDY24810	Canola	cytosol	93.73	94.32
CDY41656	Canola	cytosol, plastid, vacuole	92.16	92.74
AT4G35420.1	Thale cress	extracellular	92.79	90.8
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	74.92	73.99
PGSC0003DMT400065107	Potato	cytosol	71.47	68.06
Solyc04g008780.2.1	Tomato	cytosol	71.47	67.46
KRH09917	Soybean	mitochondrion	68.03	65.36
KRH23414	Soybean	mitochondrion	67.4	64.95
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	50.16	63.74
GSMUA_AchrUn_...	Banana	cytosol	64.58	63.38
EER99113	Sorghum	mitochondrion	63.32	61.4
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	63.32	61.4
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	63.01	61.09
Os08t0515900-01	Rice	cytosol	56.11	60.68
Zm00001d020970_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.38	60.12
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	61.13	58.21
TraesCS5A01G271200.1	Wheat	mitochondrion	61.13	56.03
TraesCS5B01G271500.1	Wheat	mitochondrion	61.13	56.03
TraesCS5D01G278800.1	Wheat	mitochondrion	60.81	55.75
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	63.01	53.46
Os09t0493500-02	Rice	plastid	60.81	53.01
CDX69634	Canola	cytosol	46.71	46.42
Zm00001d031488_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	49.84	46.36
CDY38590	Canola	cytosol	46.08	45.79
CDX96012	Canola	cytosol, nucleus, peroxisome	45.77	45.48
CDY14000	Canola	cytosol	46.08	45.09
CDY22576	Canola	cytosol	45.14	44.31
CDY43911	Canola	cytosol	45.14	44.31
CDX92530	Canola	cytosol	45.77	44.24
CDY03618	Canola	cytosol	44.83	44.0
CDY65726	Canola	cytosol	44.83	44.0
CDY35052	Canola	cytosol	37.3	43.12
CDX84988	Canola	cytosol	40.44	42.3
CDY68009	Canola	cytosol, endoplasmic reticulum, golgi	42.63	42.24
CDY42105	Canola	cytosol, plastid	42.32	42.06
CDX84989	Canola	cytosol	42.32	42.06
CDY72415	Canola	cytosol, endoplasmic reticulum, peroxisome	42.32	41.54
CDY45844	Canola	cytosol, golgi, peroxisome	42.32	41.54
CDX94965	Canola	golgi	41.69	40.92
CDX94967	Canola	plasma membrane	40.75	40.37
CDY64747	Canola	extracellular, golgi, mitochondrion, plastid	40.75	40.12
CDX81743	Canola	cytosol	42.63	40.0
CDX94968	Canola	endoplasmic reticulum, golgi, plastid	40.75	39.88
CDY52857	Canola	cytosol	42.63	39.65
CDY42108	Canola	cytosol	29.15	39.57
CDY33365	Canola	cytosol	42.32	39.36
CDX94966	Canola	golgi, mitochondrion, peroxisome, plastid	39.19	38.82
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	39.19	38.7
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	39.19	38.7
CDY63972	Canola	cytosol	40.13	38.67
CDX87345	Canola	cytosol	40.13	38.55
CDY39941	Canola	cytosol	40.13	38.55
CDY64860	Canola	cytosol	39.81	38.37
CDY09372	Canola	cytosol	34.48	34.27
CDY64748	Canola	cytosol	40.13	34.22
CDY15830	Canola	cytosol	33.86	33.64

Protein Annotations

KEGG:00040+1.1.1.-	KEGG:00051+1.1.1.-	KEGG:00140+1.1.1.-	KEGG:00240+1.1.1.-	KEGG:00253+1.1.1.-	KEGG:00362+1.1.1.-
KEGG:00363+1.1.1.-	KEGG:00365+1.1.1.-	KEGG:00400+1.1.1.-	KEGG:00520+1.1.1.-	KEGG:00523+1.1.1.-	KEGG:00591+1.1.1.-
KEGG:00622+1.1.1.-	KEGG:00625+1.1.1.-	KEGG:00633+1.1.1.-	KEGG:00640+1.1.1.-	KEGG:00650+1.1.1.-	KEGG:00680+1.1.1.-
KEGG:00720+1.1.1.-	KEGG:00750+1.1.1.-	KEGG:00830+1.1.1.-	KEGG:00950+1.1.1.-	KEGG:00966+1.1.1.-	KEGG:00981+1.1.1.-
MapMan:21.8.1.5	Gene3D:3.40.50.720	GO:A0A078BYV5	EnsemblPlants:CDX69139	ProteinID:CDX69139	ProteinID:CDX69139.1
ncoils:Coil	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009653	GO:GO:0009987
GO:GO:0016043	GO:GO:0050662	GO:GO:0080110	EnsemblPlantsGene:GSBRNA2T00130926001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370
PANTHER:PTHR10366	PANTHER:PTHR10366:SF493	SUPFAM:SSF51735	InterPro:TKPR1	UniParc:UPI0004EEB7DD	SEG:seg

Description

BnaC01g03140D

Coordinates

chrLK031789:-:3132999..3134654

Molecular Weight (calculated)

35623.8 Da

IEP (calculated)

6.316

GRAVY (calculated)

-0.127

Length

319 amino acids

Sequence
(BLAST)

001: MDQPKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLRK LEGAKERLRL VKADLMEDGS FDNAIMGCQG VFHTASPEEI LKPAIEGTLN
101: VLRSCGKNES LKRVVLTSSS STVRIRDDFD PNIPLDESVW TSVELCKRFQ VWYALSKTLA EQAAWKFCEE NSIDLVTVLP SFLVGPSLPP DLCSTASDVL
201: GLLKGETEKF QWHGQMGYVH IDDVARTHIL VFEHEAAGGR YICSSNVVSL EELVSFLSTR YPSVPIPKRF EKLNRLHYDF DTSKIKSLGL KFKSLEEMFD
301: DCIASFVEKG YLSHVVTSQ

Best Arabidopsis Sequence Match ( AT4G35420.1 )
(BLAST)

001: MDQAKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLWK LEGAKERLRL VKADLMEEGS FDNAIMGCQG VFHTASPVLK PTSNPEEEIL
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP

Arabidopsis Description

TKPR1Tetraketide alpha-pyrone reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q500U8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.