CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97711
KRH14933
KRH31163
KRH73205

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35420.1	KRG97711	AT3G08530.1	21798944
AT4G35420.1	KRH14933	AT3G08530.1	21798944
AT4G35420.1	KRH31163	AT3G08530.1	21798944
AT4G35420.1	KRH73205	AT3G08530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09917	Soybean	mitochondrion	96.07	95.78
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	71.3	73.06
CDY24810	Canola	cytosol	65.26	68.14
AT4G35420.1	Thale cress	extracellular	66.77	67.79
CDY41656	Canola	cytosol, plastid, vacuole	64.65	67.51
CDX69139	Canola	cytosol, extracellular, plastid	64.95	67.4
CDX75502	Canola	cytosol, extracellular, plastid	64.95	67.4
Bra010535.1-P	Field mustard	cytosol	62.84	67.1
PGSC0003DMT400065107	Potato	cytosol	65.86	65.07
GSMUA_AchrUn_...	Banana	cytosol	63.75	64.92
Solyc04g008780.2.1	Tomato	cytosol	65.86	64.5
EER99113	Sorghum	mitochondrion	62.84	63.22
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	47.13	62.15
Zm00001d020970_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	61.93	61.93
Os08t0515900-01	Rice	cytosol	53.17	59.66
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	58.91	59.27
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	58.91	59.27
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	59.52	58.81
TraesCS5B01G271500.1	Wheat	mitochondrion	59.82	56.9
TraesCS5A01G271200.1	Wheat	mitochondrion	59.82	56.9
TraesCS5D01G278800.1	Wheat	mitochondrion	59.52	56.61
Os09t0493500-02	Rice	plastid	60.73	54.92
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	58.61	51.6
Zm00001d031488_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	46.22	44.61
KRH75363	Soybean	cytosol	41.69	43.26
KRH49476	Soybean	cytosol	40.48	42.01
KRH24068	Soybean	endoplasmic reticulum	40.48	41.23
KRH24064	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	40.79	41.16
KRH47350	Soybean	cytosol	41.09	40.96
KRG98697	Soybean	nucleus	39.88	40.62
KRG98694	Soybean	endoplasmic reticulum	39.88	40.62
KRH44552	Soybean	cytosol	40.48	40.24
KRH72740	Soybean	cytosol	36.86	38.12
KRH09656	Soybean	cytosol	38.37	37.8
KRH24066	Soybean	mitochondrion	38.67	37.76
KRH30171	Soybean	nucleus	35.95	37.07
KRG98212	Soybean	endoplasmic reticulum	35.95	37.07
KRH23636	Soybean	cytosol	36.86	36.09
KRH11704	Soybean	cytosol	35.35	35.45
KRH17091	Soybean	cytosol, golgi, plastid	36.25	33.33

Protein Annotations

EntrezGene:100804211	MapMan:21.8.1.5	Gene3D:3.40.50.720	UniProt:A0A0R4J510	EMBL:ACUP02008465	InterPro:Epimerase_deHydtase
EnsemblPlantsGene:GLYMA_13G355600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009653	GO:GO:0009987	GO:GO:0016043
GO:GO:0050662	GO:GO:0080110	EnsemblPlants:KRH23414	ProteinID:KRH23414	ProteinID:KRH23414.1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF493	SUPFAM:SSF51735	InterPro:TKPR1	UniParc:UPI00019AA8D2
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:44407834..44409917

Molecular Weight (calculated)

36731.3 Da

IEP (calculated)

6.251

GRAVY (calculated)

-0.117

Length

331 amino acids

Sequence
(BLAST)

001: MEQRGRGRVC VTGASGFLAS WLIKRLLLSG YHVIGTVRDL GKQKKYEYLW CLEGATERLQ LVQADLMEES SFDNAIMGCK GVFHVASPVL NTISDPKSEI
101: LEPAVKGTLN VLRSCGKNPA LCRVVLTSSS STLRLRDDFD PNTPLDESSW SSLEICEKLQ AWYAMAKTQA ERAAWEYCIE NGINLVTVLP SFIIGPSLPP
201: NLCSTASDVL GLLKGETKRF QLLGRMGYVH IDDVALCQIL VYENEGSHGR YLCSSTVMDE DDLAALLANR YPTLPISKRF EKLDRPNYEL NTGKLRSLGF
301: NFKSVEEMFD DCIASLVKQG HVTLQQGHGP I

Best Arabidopsis Sequence Match ( AT4G35420.1 )
(BLAST)

001: MDQAKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLWK LEGAKERLRL VKADLMEEGS FDNAIMGCQG VFHTASPVLK PTSNPEEEIL
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP

Arabidopsis Description

TKPR1Tetraketide alpha-pyrone reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q500U8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.