Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- plastid 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_03s0017g00210.t01 | |
| VIT_16s0115g00130.t01 | |
| VIT_19s0027g01340.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G35420.1 | VIT_03s0017g00210.t01 | AT3G08530.1 | 21798944 |
| AT4G35420.1 | VIT_16s0115g00130.t01 | AT3G08530.1 | 21798944 |
| AT4G35420.1 | VIT_19s0027g01340.t01 | AT3G08530.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0038g04220.t01 | Wine grape | endoplasmic reticulum | 76.1 | 59.13 |
| AT4G35420.1 | Thale cress | extracellular | 65.34 | 50.31 |
| CDX69139 | Canola | cytosol, extracellular, plastid | 63.74 | 50.16 |
| CDX75502 | Canola | cytosol, extracellular, plastid | 63.74 | 50.16 |
| CDY24810 | Canola | cytosol | 62.95 | 49.84 |
| CDY41656 | Canola | cytosol, plastid, vacuole | 62.95 | 49.84 |
| Bra010535.1-P | Field mustard | cytosol | 60.16 | 48.71 |
| KRH09917 | Soybean | mitochondrion | 62.95 | 47.59 |
| KRH23414 | Soybean | mitochondrion | 62.15 | 47.13 |
| PGSC0003DMT400065107 | Potato | cytosol | 62.15 | 46.57 |
| Solyc04g008780.2.1 | Tomato | cytosol | 62.15 | 46.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.57 | 45.23 |
| EER99113 | Sorghum | mitochondrion | 57.77 | 44.07 |
| Zm00001d020970_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 56.57 | 42.9 |
| Os08t0515900-01 | Rice | cytosol | 49.8 | 42.37 |
| TraesCS7B01G141100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 54.98 | 41.95 |
| TraesCS7D01G248800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 54.18 | 41.34 |
| EES14250 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 52.59 | 39.4 |
| TraesCS5A01G271200.1 | Wheat | mitochondrion | 54.58 | 39.37 |
| TraesCS5B01G271500.1 | Wheat | mitochondrion | 54.58 | 39.37 |
| TraesCS5D01G278800.1 | Wheat | mitochondrion | 54.18 | 39.08 |
| Os09t0493500-02 | Rice | plastid | 55.38 | 37.98 |
| TraesCS7A01G250100.1 | Wheat | cytosol, mitochondrion, plastid | 55.38 | 36.97 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 41.43 | 32.5 |
| VIT_13s0064g00290.t01 | Wine grape | cytosol, extracellular, plastid | 27.89 | 32.41 |
| VIT_13s0064g00270.t01 | Wine grape | cytosol, endoplasmic reticulum | 40.64 | 31.29 |
| Zm00001d031488_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 42.23 | 30.9 |
| VIT_13s0047g00540.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 39.04 | 30.34 |
| VIT_13s0047g00940.t01 | Wine grape | cytosol | 39.04 | 30.34 |
| VIT_13s0067g00530.t01 | Wine grape | endoplasmic reticulum | 38.65 | 29.75 |
| VIT_13s0067g00460.t01 | Wine grape | endoplasmic reticulum | 38.65 | 29.75 |
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 38.65 | 29.66 |
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 38.25 | 29.36 |
| VIT_03s0110g00350.t01 | Wine grape | cytosol | 37.85 | 29.32 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 39.44 | 29.29 |
| VIT_06s0004g02380.t01 | Wine grape | endoplasmic reticulum, golgi, plastid | 37.45 | 29.19 |
| VIT_06s0004g02370.t01 | Wine grape | endoplasmic reticulum, golgi | 36.26 | 28.26 |
| VIT_13s0101g00250.t01 | Wine grape | cytosol | 31.08 | 27.76 |
| VIT_15s0107g00210.t01 | Wine grape | extracellular, plastid | 37.85 | 27.54 |
| VIT_13s0101g00240.t01 | Wine grape | cytosol | 28.29 | 27.52 |
| VIT_13s0067g00690.t01 | Wine grape | cytosol | 33.07 | 26.86 |
| VIT_13s0067g00680.t01 | Wine grape | cytosol | 29.48 | 26.71 |
| VIT_06s0004g07130.t01 | Wine grape | cytosol | 33.47 | 25.53 |
| VIT_12s0035g02070.t01 | Wine grape | cytosol | 33.07 | 24.92 |
| VIT_13s0047g00550.t01 | Wine grape | mitochondrion, vacuole | 33.86 | 24.64 |
| VIT_13s0047g00990.t01 | Wine grape | endoplasmic reticulum | 39.04 | 16.07 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | ProteinID:CCB60503 | ProteinID:CCB60503.1 | InterPro:Epimerase_deHydtase | UniProt:F6I0N7 |
| EMBL:FN596508 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0050662 | GO:GO:0080110 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01370 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF493 |
| SUPFAM:SSF51735 | InterPro:TKPR1 | UniParc:UPI0002109732 | ArrayExpress:VIT_03s0038g04230 | EnsemblPlantsGene:VIT_03s0038g04230 | EnsemblPlants:VIT_03s0038g04230.t01 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:3052629..3059259
Molecular Weight (calculated)
27834.2 Da
IEP (calculated)
5.907
GRAVY (calculated)
-0.224
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQKMKVYVT GASGFLASWL VKRHLLSGKW QEAGTSVGLE GARERLTLAR ADLMEEGGFD RAIMGCHGVF HTASPAEILV PAVEGTLNVL RSCKKNPSLR
101: RVVLTSSTSA VRARDDFDPK IPLQDESSWS SVEFCERLQG RLRNADGLEG WNMFTSMMLH SATSILVYEH EDAHGRYLCS SAELDDNELT SLLSARYPSL
201: PIPKRSDALD IPYVEFNTSK LKSLGFKFKS IQDMFDDCIA SLVEEGHLGQ V
101: RVVLTSSTSA VRARDDFDPK IPLQDESSWS SVEFCERLQG RLRNADGLEG WNMFTSMMLH SATSILVYEH EDAHGRYLCS SAELDDNELT SLLSARYPSL
201: PIPKRSDALD IPYVEFNTSK LKSLGFKFKS IQDMFDDCIA SLVEEGHLGQ V
001: MDQAKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLWK LEGAKERLRL VKADLMEEGS FDNAIMGCQG VFHTASPVLK PTSNPEEEIL
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP
Arabidopsis Description
TKPR1Tetraketide alpha-pyrone reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q500U8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.