Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 3
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0064g00290.t01 | Wine grape | cytosol, extracellular, plastid | 59.21 | 75.93 |
| TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 51.26 | 65.14 |
| VIT_13s0101g00250.t01 | Wine grape | cytosol | 60.65 | 59.79 |
| VIT_13s0047g00540.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 68.23 | 58.51 |
| VIT_13s0047g00940.t01 | Wine grape | cytosol | 68.23 | 58.51 |
| VIT_13s0064g00270.t01 | Wine grape | cytosol, endoplasmic reticulum | 64.26 | 54.6 |
| VIT_13s0067g00460.t01 | Wine grape | endoplasmic reticulum | 64.26 | 54.6 |
| VIT_13s0067g00530.t01 | Wine grape | endoplasmic reticulum | 64.26 | 54.6 |
| VIT_03s0110g00350.t01 | Wine grape | cytosol | 62.09 | 53.09 |
| VIT_06s0004g02370.t01 | Wine grape | endoplasmic reticulum, golgi | 60.29 | 51.86 |
| VIT_06s0004g02380.t01 | Wine grape | endoplasmic reticulum, golgi, plastid | 59.93 | 51.55 |
| VIT_13s0101g00240.t01 | Wine grape | cytosol | 48.01 | 51.55 |
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 60.65 | 51.38 |
| VIT_15s0107g00210.t01 | Wine grape | extracellular, plastid | 63.54 | 51.01 |
| VIT_13s0067g00690.t01 | Wine grape | cytosol | 56.68 | 50.81 |
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 59.93 | 50.76 |
| GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 56.68 | 48.61 |
| GSMUA_Achr8P24040_001 | Banana | plastid | 56.32 | 48.3 |
| GSMUA_Achr8P24060_001 | Banana | plastid | 56.32 | 48.3 |
| GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 55.96 | 47.26 |
| TraesCS4A01G331900.2 | Wheat | golgi, unclear | 55.96 | 46.97 |
| TraesCS5D01G540800.1 | Wheat | plastid | 55.6 | 46.67 |
| TraesCS5B01G547200.1 | Wheat | unclear | 55.6 | 46.67 |
| TraesCS5D01G541100.1 | Wheat | golgi | 55.23 | 46.36 |
| Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 55.23 | 45.54 |
| KXG30065 | Sorghum | plastid | 54.87 | 45.51 |
| TraesCS5B01G547000.1 | Wheat | golgi | 54.15 | 45.45 |
| VIT_13s0047g00550.t01 | Wine grape | mitochondrion, vacuole | 55.6 | 44.64 |
| HORVU5Hr1G122150.1 | Barley | plastid | 55.23 | 42.5 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 51.99 | 42.48 |
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 51.99 | 39.89 |
| Zm00001d015956_P002 | Maize | plastid | 54.87 | 39.69 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 52.71 | 39.25 |
| TraesCS5B01G546700.1 | Wheat | peroxisome, plastid | 30.32 | 37.17 |
| VIT_03s0038g04220.t01 | Wine grape | endoplasmic reticulum | 41.16 | 35.29 |
| VIT_06s0004g07130.t01 | Wine grape | cytosol | 39.71 | 33.43 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 40.79 | 33.43 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 37.91 | 32.81 |
| VIT_13s0047g00990.t01 | Wine grape | endoplasmic reticulum | 68.23 | 30.98 |
| VIT_03s0038g04230.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 26.71 | 29.48 |
| VIT_12s0035g02070.t01 | Wine grape | cytosol | 32.85 | 27.33 |
Protein Annotations
| ArrayExpress:VIT_13s0067g00680 | EMBL:FN596756 | EnsemblPlants:VIT_13s0067g00680.t01 | EnsemblPlantsGene:VIT_13s0067g00680 | Gene3D:3.40.50.720 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 |
| PANTHER:PTHR10366:SF407 | PFAM:PF01370 | ProteinID:CCB62580 | ProteinID:CCB62580.1 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI000210AB78 | UniProt:F6I6L2 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr13_random:-:365087..367185
Molecular Weight (calculated)
30862.6 Da
IEP (calculated)
8.855
GRAVY (calculated)
-0.022
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEGKVVCV SGASGYIASW LVKLLLEQGY YVRATVRNPN DTKKTGHLLA LDGAKERLHL FKADLLEEGS FDSVVDGCDG VFHTASPAAL EVTDPQADLI
101: DPALKGTMNV LRSCAKIPSV KRVVVTASMA TVVANGKPLT PDVLVDESWF SDPVFFQETK QWYMLSKTLA EEASWKFAKE NGMDMVVMNP GWVIGPVLHP
201: ILNLSVEEVP KLINGGQTFL NIPYRWMLQM HTFKFCTTST LVYTFPKSVR MTNLVRQPTG YPKRKQKVWA FTSLLWR
101: DPALKGTMNV LRSCAKIPSV KRVVVTASMA TVVANGKPLT PDVLVDESWF SDPVFFQETK QWYMLSKTLA EEASWKFAKE NGMDMVVMNP GWVIGPVLHP
201: ILNLSVEEVP KLINGGQTFL NIPYRWMLQM HTFKFCTTST LVYTFPKSVR MTNLVRQPTG YPKRKQKVWA FTSLLWR
001: MNCGGKVVCV TGASGYIASW IVKLLLLRGY TVNATVRDPK DKKKTEHLLA LDGAKERLKL FKADLLEESS FDQAIDGCDA VFHTASPVLF TVTDPQTELI
101: DPALKGTINV LNTCKQVSSV KRVILTSSTA AVLSRQPPIG PNDLVDETFF SDPSLCRETK NWYSLSKILA ENAAWQFAKD NGIDMVVLNP GFICGPLLQP
201: TLNMSVELIV DFINGKNPFN KRYYRFSDVR DVALVHIKAL ETPSANGRYI IDGPNMSVND IIDILRKLFP DLSIADTNEE SEMNEMICQV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL
101: DPALKGTINV LNTCKQVSSV KRVILTSSTA AVLSRQPPIG PNDLVDETFF SDPSLCRETK NWYSLSKILA ENAAWQFAKD NGIDMVVLNP GFICGPLLQP
201: TLNMSVELIV DFINGKNPFN KRYYRFSDVR DVALVHIKAL ETPSANGRYI IDGPNMSVND IIDILRKLFP DLSIADTNEE SEMNEMICQV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL
Arabidopsis Description
At1g09490/F14J9_15 [Source:UniProtKB/TrEMBL;Acc:O80532]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.