Factsheet for VIT_13s0047g00990.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
plastid 3
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0047g00940.t01	Wine grape	cytosol	51.8	97.83
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	51.64	97.52
VIT_13s0101g00240.t01	Wine grape	cytosol	40.66	96.12
VIT_13s0064g00290.t01	Wine grape	cytosol, extracellular, plastid	32.62	92.13
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	41.8	78.22
VIT_13s0067g00530.t01	Wine grape	endoplasmic reticulum	41.15	76.99
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	40.98	76.69
VIT_03s0110g00350.t01	Wine grape	cytosol	40.66	76.54
VIT_15s0107g00210.t01	Wine grape	extracellular, plastid	41.31	73.04
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	38.2	72.36
VIT_13s0101g00250.t01	Wine grape	cytosol	32.46	70.46
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	36.72	69.57
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	37.21	69.42
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	24.75	69.27
VIT_13s0067g00690.t01	Wine grape	cytosol	35.08	69.26
GSMUA_Achr8P24070_001	Banana	golgi, plastid	36.39	68.73
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	36.72	68.5
VIT_13s0067g00680.t01	Wine grape	cytosol	30.98	68.23
GSMUA_Achr8P24060_001	Banana	plastid	36.07	68.11
GSMUA_Achr8P24040_001	Banana	plastid	35.9	67.8
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	36.39	67.68
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	37.87	66.96
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	35.08	63.69
KXG30065	Sorghum	plastid	34.75	63.47
TraesCS4A01G331900.2	Wheat	golgi, unclear	34.26	63.33
TraesCS5D01G540800.1	Wheat	plastid	33.93	62.73
TraesCS5B01G547200.1	Wheat	unclear	33.93	62.73
TraesCS5D01G541100.1	Wheat	golgi	33.77	62.42
TraesCS5B01G547000.1	Wheat	golgi	33.77	62.42
TraesCS4D01G343400.1	Wheat	cytosol	32.3	58.11
HORVU5Hr1G122150.1	Barley	plastid	33.93	57.5
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	20.66	55.75
Zm00001d015956_P002	Maize	plastid	34.75	55.35
HORVU4Hr1G085100.1	Barley	cytosol	33.44	54.84
TraesCS5A01G517000.1	Wheat	mitochondrion	32.13	54.29
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	24.43	46.13
VIT_09s0070g00240.t01	Wine grape	cytosol	25.25	45.56
VIT_06s0004g07130.t01	Wine grape	cytosol	24.43	45.29
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	22.95	43.75
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	16.07	39.04
VIT_12s0035g02070.t01	Wine grape	cytosol	19.67	36.04

Protein Annotations

EntrezGene:100245438	wikigene:100245438	Gene3D:3.40.50.720	MapMan:35.1	ProteinID:CCB52159	ProteinID:CCB52159.1
InterPro:Epimerase_deHydtase	UniProt:F6HIZ3	EMBL:FN595767	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854
GO:GO:0005488	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016616	GO:GO:0050662	GO:GO:0055114	EntrezGene:LOC100245438	wikigene:LOC100245438	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF407	SUPFAM:SSF51735	UniParc:UPI0002108DC8	ArrayExpress:VIT_13s0047g00990
EnsemblPlantsGene:VIT_13s0047g00990	EnsemblPlants:VIT_13s0047g00990.t01	:	:	:	:

Description

No Description!

Coordinates

chr13:+:17793709..17809027

Molecular Weight (calculated)

67564.3 Da

IEP (calculated)

5.835

GRAVY (calculated)

-0.130

Length

610 amino acids

Sequence
(BLAST)

001: MSGQGKVVCV TGASGYIASW LVKLLLQRGY TVKATVRDPN DPKKTEHLLA LEGAKERLHL FEANLLEEGS FDSVVDGCDG VFHTASPVVM IVDDPQAQLI
101: DPALKGTMNV LGSCAKVPSV KRVVVTSSMA SVAFNGKHLA PDVLVDESWF SDPVFCEKSK LWYMLSKTLA EEAAWKFAKE NGIDMVTINP GWVIGPLLQP
201: TLNLSVEEVL KLLKGDTFPN KTHRWVDVRD VAMAHIQAYE LPTARGRYCL VGSILHCSET MKILRKLYPA LNLPEKCADD KPYEPTYMVS QEKTKSLGID
301: FTPLEVSMKD TVESLREKNF GDEWRRKGGV RDRSFWVYCF MAGEAPAPTP LHSQATVRDP NDPKKTQHLL SLDGAQERLH LFKADLLEEG SFDSVVDGCD
401: GVFHTASPVA LEAINPQTEL IDLALKGTIN VLRSCSKVPS VKRVVVTSSL ASVLFTGEPL TPEVLIDESW FSDPVLCKES KQWYVLSKTL AEEAAWNFSK
501: ENGIDMVTIN PGWVIGPLLQ PTLNLSAEQV LNLINGAQTF PNISSWWVDI LRKLYPGLPL PERCADDKPY APSSRVSQEK AKSLGIHFTR LEVSLKDTVE
601: SLKEKNFVSF

Best Arabidopsis Sequence Match ( AT1G09510.1 )
(BLAST)

001: MADGGKMVCV TGASGYVASW IVKLLLLRGY TVRATVRDPS DEKKTEHLLA LDGAKEKLKL FKADLLEEGS FEQAIEGCDA VFHTASPVSL TVTDPQIELI
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV

Arabidopsis Description

At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.