Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0107g00210.t01 | Wine grape | extracellular, plastid | 87.12 | 82.32 |
| VIT_13s0047g00940.t01 | Wine grape | cytosol | 78.53 | 79.26 |
| VIT_13s0101g00250.t01 | Wine grape | cytosol | 67.79 | 78.65 |
| VIT_13s0047g00540.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 77.61 | 78.33 |
| VIT_13s0067g00530.t01 | Wine grape | endoplasmic reticulum | 78.22 | 78.22 |
| VIT_13s0067g00460.t01 | Wine grape | endoplasmic reticulum | 78.22 | 78.22 |
| VIT_13s0101g00240.t01 | Wine grape | cytosol | 61.35 | 77.52 |
| VIT_13s0064g00290.t01 | Wine grape | cytosol, extracellular, plastid | 49.69 | 75.0 |
| VIT_13s0047g00550.t01 | Wine grape | mitochondrion, vacuole | 78.83 | 74.49 |
| VIT_06s0004g02380.t01 | Wine grape | endoplasmic reticulum, golgi, plastid | 71.78 | 72.67 |
| VIT_06s0004g02370.t01 | Wine grape | endoplasmic reticulum, golgi | 71.17 | 72.05 |
| VIT_03s0110g00350.t01 | Wine grape | cytosol | 71.17 | 71.6 |
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 69.02 | 68.81 |
| VIT_13s0067g00690.t01 | Wine grape | cytosol | 65.03 | 68.61 |
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 67.48 | 67.28 |
| GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 66.26 | 66.87 |
| GSMUA_Achr8P24060_001 | Banana | plastid | 66.26 | 66.87 |
| TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 44.48 | 66.51 |
| GSMUA_Achr8P24040_001 | Banana | plastid | 65.34 | 65.94 |
| GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 65.34 | 64.94 |
| VIT_13s0067g00680.t01 | Wine grape | cytosol | 54.6 | 64.26 |
| KXG30065 | Sorghum | plastid | 65.03 | 63.47 |
| Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 64.11 | 62.2 |
| TraesCS4A01G331900.2 | Wheat | golgi, unclear | 62.88 | 62.12 |
| TraesCS5D01G540800.1 | Wheat | plastid | 62.27 | 61.52 |
| TraesCS5B01G547200.1 | Wheat | unclear | 62.27 | 61.52 |
| TraesCS5D01G541100.1 | Wheat | golgi | 61.96 | 61.21 |
| TraesCS5B01G547000.1 | Wheat | golgi | 61.96 | 61.21 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 59.82 | 57.52 |
| HORVU5Hr1G122150.1 | Barley | plastid | 62.58 | 56.67 |
| TraesCS5B01G546700.1 | Wheat | peroxisome, plastid | 38.96 | 56.19 |
| Zm00001d015956_P002 | Maize | plastid | 64.42 | 54.83 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 61.04 | 53.49 |
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 58.9 | 53.19 |
| VIT_03s0038g04220.t01 | Wine grape | endoplasmic reticulum | 46.01 | 46.44 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 46.32 | 44.67 |
| VIT_06s0004g07130.t01 | Wine grape | cytosol | 44.17 | 43.77 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 41.72 | 42.5 |
| VIT_13s0047g00990.t01 | Wine grape | endoplasmic reticulum | 78.22 | 41.8 |
| VIT_03s0038g04230.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 31.29 | 40.64 |
| VIT_12s0035g02070.t01 | Wine grape | cytosol | 38.65 | 37.84 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | ProteinID:CBI24952 | ProteinID:CBI24952.3 | UniProt:D7T371 | InterPro:Epimerase_deHydtase |
| EMBL:FN595509 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0015074 |
| GO:GO:0050662 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01370 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF492 | SUPFAM:SSF51735 |
| UniParc:UPI0001BE239B | ArrayExpress:VIT_13s0064g00270 | EnsemblPlantsGene:VIT_13s0064g00270 | EnsemblPlants:VIT_13s0064g00270.t01 | : | : |
Description
No Description!
Coordinates
chr13:-:21800232..21802582
Molecular Weight (calculated)
36078.6 Da
IEP (calculated)
5.931
GRAVY (calculated)
-0.010
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCGEGKVVC VTGASGFIAS WLVKLLLQHD YTVKATVRDP NDPKKTQHLL SLDGAKERLH LFKADLLEEG SFDSVVDGCD GVFHTASPVA MDVVNPQAEL
101: IDPALKGTIN VLRSCAKFPS VKRVVVTSSM AAVVFTGKPL TSEVLIDESW FSDPVLCKES KLWYVLSKTL AEEAAWKFSK ENGIDMVTIN PAWVIGPLIQ
201: PTLNLSAEVV LNLINDTLQQ LMKISYRLVD VRDVANAHIQ AYEIPEASGR YCLVEKDLHY SETVKILRKL YPELPLPEKC ADDKPYAPSS RVSQEKVKSL
301: GIHFTPLEVS LKDTVESLKE KNFVSF
101: IDPALKGTIN VLRSCAKFPS VKRVVVTSSM AAVVFTGKPL TSEVLIDESW FSDPVLCKES KLWYVLSKTL AEEAAWKFSK ENGIDMVTIN PAWVIGPLIQ
201: PTLNLSAEVV LNLINDTLQQ LMKISYRLVD VRDVANAHIQ AYEIPEASGR YCLVEKDLHY SETVKILRKL YPELPLPEKC ADDKPYAPSS RVSQEKVKSL
301: GIHFTPLEVS LKDTVESLKE KNFVSF
001: MANSGEGKVV CVTGASGYIA SWLVKFLLSR GYTVKASVRD PSDPKKTQHL VSLEGAKERL HLFKADLLEQ GSFDSAIDGC HGVFHTASPF FNDAKDPQAE
101: LIDPAVKGTL NVLNSCAKAS SVKRVVVTSS MAAVGYNGKP RTPDVTVDET WFSDPELCEA SKMWYVLSKT LAEDAAWKLA KEKGLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNLINGAKT FPNLSFGWVN VKDVANAHIQ AFEVPSANGR YCLVERVVHH SEIVNILREL YPNLPLPERC VDENPYVPTY QVSKDKTRSL
301: GIDYIPLKVS IKETVESLKE KGFAQF
101: LIDPAVKGTL NVLNSCAKAS SVKRVVVTSS MAAVGYNGKP RTPDVTVDET WFSDPELCEA SKMWYVLSKT LAEDAAWKLA KEKGLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNLINGAKT FPNLSFGWVN VKDVANAHIQ AFEVPSANGR YCLVERVVHH SEIVNILREL YPNLPLPERC VDENPYVPTY QVSKDKTRSL
301: GIDYIPLKVS IKETVESLKE KGFAQF
Arabidopsis Description
At5g19440 [Source:UniProtKB/TrEMBL;Acc:Q29Q34]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.