Factsheet for VIT_13s0101g00240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0047g00940.t01	Wine grape	cytosol	95.35	76.16
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	94.19	75.23
VIT_13s0064g00290.t01	Wine grape	cytosol, extracellular, plastid	52.33	62.5
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	77.52	61.35
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	76.36	60.43
VIT_13s0067g00530.t01	Wine grape	endoplasmic reticulum	76.36	60.43
VIT_03s0110g00350.t01	Wine grape	cytosol	74.03	58.95
VIT_13s0067g00690.t01	Wine grape	cytosol	68.6	57.28
VIT_15s0107g00210.t01	Wine grape	extracellular, plastid	76.36	57.1
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	68.99	55.28
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	69.38	54.74
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	67.83	54.35
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	68.6	54.13
GSMUA_Achr8P24070_001	Banana	golgi, plastid	64.73	51.7
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	65.5	51.52
GSMUA_Achr8P24060_001	Banana	plastid	64.34	51.39
VIT_13s0101g00250.t01	Wine grape	cytosol	55.81	51.25
GSMUA_Achr8P24040_001	Banana	plastid	63.95	51.08
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	68.22	51.01
KXG30065	Sorghum	plastid	62.4	48.2
VIT_13s0067g00680.t01	Wine grape	cytosol	51.55	48.01
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	62.4	47.92
TraesCS4A01G331900.2	Wheat	golgi, unclear	61.24	47.88
TraesCS5B01G547000.1	Wheat	golgi	60.85	47.58
TraesCS5D01G540800.1	Wheat	plastid	60.47	47.27
TraesCS5B01G547200.1	Wheat	unclear	60.08	46.97
TraesCS5D01G541100.1	Wheat	golgi	59.69	46.67
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	38.37	45.41
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	39.15	44.69
TraesCS4D01G343400.1	Wheat	cytosol	56.59	43.07
HORVU5Hr1G122150.1	Barley	plastid	60.08	43.06
HORVU4Hr1G085100.1	Barley	cytosol	60.08	41.67
Zm00001d015956_P002	Maize	plastid	61.63	41.51
TraesCS5A01G517000.1	Wheat	mitochondrion	56.98	40.72
VIT_13s0047g00990.t01	Wine grape	endoplasmic reticulum	96.12	40.66
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	45.35	36.22
VIT_06s0004g07130.t01	Wine grape	cytosol	44.57	34.95
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	43.02	34.69
VIT_09s0070g00240.t01	Wine grape	cytosol	44.57	34.02
VIT_12s0035g02070.t01	Wine grape	cytosol	37.21	28.83
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	27.52	28.29

Protein Annotations

ArrayExpress:VIT_13s0101g00240	EMBL:FN596004	EnsemblPlants:VIT_13s0101g00240.t01	EnsemblPlantsGene:VIT_13s0101g00240	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR10366	PANTHER:PTHR10366:SF407	ProteinID:CCB56728	ProteinID:CCB56728.1	SUPFAM:SSF51735	UniParc:UPI00021082AC
UniProt:F6HPX2	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr13:+:11919602..11934845

Molecular Weight (calculated)

28932.2 Da

IEP (calculated)

6.254

GRAVY (calculated)

-0.127

Length

258 amino acids

Sequence
(BLAST)

001: MQVVLIYATD DPKKTEHLLA LEGAKERLHL FEANLLEEGS FDSVVDGCDG VFHTASPVVI IVDDPQAQLI DPALKGTMNV LRSCAKVPSV KRKSKLWYML
101: SKTLAEEAAW KFAKENGIDM VTINPGWVIG PLLQPTLNLS VEEVLKLLKG DTFPNKTHRW VDVRDVAMAH IQAYELPTAR GRYCLVGSIL HCSETMKILR
201: KLYPALNLPE KCADDKPYEP TYMVSQEKTK SLGIDFTPLE VSLKDTVESL REKNFVSF

Best Arabidopsis Sequence Match ( AT1G09490.1 )
(BLAST)

001: MNCGGKVVCV TGASGYIASW IVKLLLLRGY TVNATVRDPK DKKKTEHLLA LDGAKERLKL FKADLLEESS FDQAIDGCDA VFHTASPVLF TVTDPQTELI
101: DPALKGTINV LNTCKQVSSV KRVILTSSTA AVLSRQPPIG PNDLVDETFF SDPSLCRETK NWYSLSKILA ENAAWQFAKD NGIDMVVLNP GFICGPLLQP
201: TLNMSVELIV DFINGKNPFN KRYYRFSDVR DVALVHIKAL ETPSANGRYI IDGPNMSVND IIDILRKLFP DLSIADTNEE SEMNEMICQV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL

Arabidopsis Description

At1g09490/F14J9_15 [Source:UniProtKB/TrEMBL;Acc:O80532]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.