Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 94.69 | 88.92 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 87.61 | 79.84 |
| Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 73.45 | 74.11 |
| TraesCS5D01G540800.1 | Wheat | plastid | 71.98 | 73.94 |
| KXG30065 | Sorghum | plastid | 71.98 | 73.05 |
| TraesCS5D01G541100.1 | Wheat | golgi | 69.62 | 71.52 |
| GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 64.01 | 67.18 |
| GSMUA_Achr8P24060_001 | Banana | plastid | 63.72 | 66.87 |
| GSMUA_Achr8P24040_001 | Banana | plastid | 62.83 | 65.94 |
| GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 63.72 | 65.85 |
| VIT_13s0064g00290.t01 | Wine grape | cytosol, extracellular, plastid | 40.41 | 63.43 |
| VIT_03s0110g00350.t01 | Wine grape | cytosol | 60.18 | 62.96 |
| Zm00001d015956_P002 | Maize | plastid | 71.09 | 62.92 |
| VIT_13s0047g00940.t01 | Wine grape | cytosol | 58.11 | 60.99 |
| VIT_13s0047g00540.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 58.11 | 60.99 |
| VIT_13s0064g00270.t01 | Wine grape | cytosol, endoplasmic reticulum | 57.52 | 59.82 |
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 56.64 | 58.72 |
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 56.64 | 58.72 |
| VIT_13s0067g00460.t01 | Wine grape | endoplasmic reticulum | 56.05 | 58.28 |
| VIT_13s0067g00530.t01 | Wine grape | endoplasmic reticulum | 55.75 | 57.98 |
| Solyc01g087640.2.1 | Tomato | cytosol | 55.16 | 57.01 |
| VIT_13s0101g00240.t01 | Wine grape | cytosol | 43.07 | 56.59 |
| VIT_13s0101g00250.t01 | Wine grape | cytosol | 46.61 | 56.23 |
| Bra031666.1-P | Field mustard | golgi | 51.33 | 55.06 |
| VIT_15s0107g00210.t01 | Wine grape | extracellular, plastid | 55.75 | 54.78 |
| CDY68009 | Canola | cytosol, endoplasmic reticulum, golgi | 51.92 | 54.66 |
| CDY45844 | Canola | cytosol, golgi, peroxisome | 51.62 | 53.85 |
| Bra038342.1-P | Field mustard | cytosol, golgi, peroxisome | 51.62 | 53.85 |
| CDY72415 | Canola | cytosol, endoplasmic reticulum, peroxisome | 51.33 | 53.54 |
| AT1G09490.1 | Thale cress | golgi | 49.56 | 52.17 |
| VIT_13s0067g00680.t01 | Wine grape | cytosol | 42.48 | 51.99 |
| AT1G09510.1 | Thale cress | cytosol, plastid, vacuole | 49.26 | 51.86 |
| CDX94966 | Canola | golgi, mitochondrion, peroxisome, plastid | 49.26 | 51.86 |
| AT1G66800.1 | Thale cress | peroxisome, plasma membrane, plastid | 48.67 | 51.72 |
| AT1G09500.1 | Thale cress | endoplasmic reticulum | 49.56 | 51.69 |
| CDX94965 | Canola | golgi | 48.97 | 51.08 |
| VIT_13s0067g00690.t01 | Wine grape | cytosol | 46.31 | 50.81 |
| CDY64747 | Canola | extracellular, golgi, mitochondrion, plastid | 48.38 | 50.62 |
| Bra020019.1-P | Field mustard | extracellular, golgi | 48.67 | 50.61 |
| Bra020021.1-P | Field mustard | golgi | 47.79 | 50.31 |
| Bra020020.1-P | Field mustard | extracellular, golgi | 47.2 | 49.69 |
| VIT_13s0047g00550.t01 | Wine grape | mitochondrion, vacuole | 50.44 | 49.57 |
| CDX94968 | Canola | endoplasmic reticulum, golgi, plastid | 47.49 | 49.39 |
| CDX94967 | Canola | plasma membrane | 46.9 | 49.38 |
| AT1G09480.1 | Thale cress | cytosol | 48.97 | 44.99 |
| TraesCS7D01G248800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 42.77 | 44.07 |
| CDY64748 | Canola | cytosol | 48.08 | 43.58 |
| TraesCS5D01G232400.1 | Wheat | cytosol, peroxisome, plastid | 44.54 | 43.02 |
| TraesCS5D01G486300.2 | Wheat | cytosol | 41.3 | 42.42 |
| TraesCS5D01G278800.1 | Wheat | mitochondrion | 43.07 | 41.95 |
| TraesCS7D01G150500.1 | Wheat | cytosol | 42.18 | 41.94 |
| TraesCS7D01G150600.1 | Wheat | cytosol | 41.89 | 41.4 |
| TraesCS5D01G073300.1 | Wheat | cytosol | 40.71 | 41.07 |
| TraesCS5D01G073400.1 | Wheat | cytosol | 40.71 | 40.71 |
| TraesCS5D01G168400.1 | Wheat | cytosol | 42.77 | 40.62 |
| TraesCS6D01G369500.1 | Wheat | peroxisome | 40.12 | 39.77 |
| TraesCS6D01G366400.1 | Wheat | cytosol | 38.94 | 39.64 |
| TraesCS6D01G365900.1 | Wheat | cytosol | 39.23 | 39.35 |
| TraesCS6D01G365700.1 | Wheat | cytosol | 38.64 | 37.97 |
| TraesCS6D01G136600.2 | Wheat | extracellular, vacuole | 38.35 | 37.79 |
| TraesCS6D01G366200.1 | Wheat | cytosol | 37.76 | 37.1 |
| TraesCS3D01G033300.1 | Wheat | cytosol | 35.69 | 36.78 |
| TraesCS3D01G342200.2 | Wheat | cytosol | 36.87 | 36.44 |
| TraesCS6D01G366000.1 | Wheat | cytosol | 37.46 | 32.99 |
| VIT_13s0047g00990.t01 | Wine grape | endoplasmic reticulum | 58.11 | 32.3 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G343400.1 | EnsemblPlantsGene:TraesCS4D01G343400 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003854 |
| GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016616 |
| GO:GO:0055114 | InterPro:3Beta_OHSteriod_DH/Estase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF407 | PFAM:PF01073 |
| SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4D:+:499449739..499454326
Molecular Weight (calculated)
37516.0 Da
IEP (calculated)
5.263
GRAVY (calculated)
-0.047
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKQQQGSN VEEGSSRAAG KVVCVTGASG YIASWIVKLL LDRGYTVHGT VRDTADPDKT WHLRALDGAN DRLQLFNANL LEEGSFDAAI DGCECVFHAA
101: SPVFFTIKDP KAELLEAAVS GTLDVLRSCK KASVKRVVIT SSMAAVTFNG KPRTPDVIVD ETWFSVPELC EKHQQWYVLS KTLAEEAAWK FSKDNELEIV
201: VMHPTMVIGP LLQPTLNASV EVILNLINGS SSTYPNIAHG WVNVKDVALA HILAYEVPSA DGRYCIVERV AHYLELVKII SKMYPNIPLP YKRGDDEPLF
301: PTYQVSTDKI RSLGVELIPL ETTIKETIES LKERGFFEF
101: SPVFFTIKDP KAELLEAAVS GTLDVLRSCK KASVKRVVIT SSMAAVTFNG KPRTPDVIVD ETWFSVPELC EKHQQWYVLS KTLAEEAAWK FSKDNELEIV
201: VMHPTMVIGP LLQPTLNASV EVILNLINGS SSTYPNIAHG WVNVKDVALA HILAYEVPSA DGRYCIVERV AHYLELVKII SKMYPNIPLP YKRGDDEPLF
301: PTYQVSTDKI RSLGVELIPL ETTIKETIES LKERGFFEF
001: MADGGKVVCV TGASGYIASW IVKLLLFRGY TINATVRDPK DRKKTDHLLA LDGAKERLKL FKADLLDEGS FELAIDGCET VFHTASPVAI TVKTDPQVEL
101: INPAVNGTIN VLRTCTKVSS VKRVILTSSM AAVLAPETKL GPNDVVDETF FTNPSFAEER KQWYVLSKTL AEDAAWRFAK DNEIDLIVLN PGLVTGPILQ
201: PTLNFSVAVI VELMKGKNPF NTTHHRFVDV RDVALAHVKA LETPSANGRY IIDGPVVTIK DIENVLREFF PDLCIADRNE DITELNSVTF NVCLDKVKSL
301: GIIEFTPTET SLRDTVLSLK EKCLV
101: INPAVNGTIN VLRTCTKVSS VKRVILTSSM AAVLAPETKL GPNDVVDETF FTNPSFAEER KQWYVLSKTL AEDAAWRFAK DNEIDLIVLN PGLVTGPILQ
201: PTLNFSVAVI VELMKGKNPF NTTHHRFVDV RDVALAHVKA LETPSANGRY IIDGPVVTIK DIENVLREFF PDLCIADRNE DITELNSVTF NVCLDKVKSL
301: GIIEFTPTET SLRDTVLSLK EKCLV
Arabidopsis Description
At1g09500/F14J9_16 [Source:UniProtKB/TrEMBL;Acc:O80533]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.