CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi
Any Predictor:	cytosol, endoplasmic reticulum, golgi
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031666.1-P	Field mustard	golgi	98.14	100.0
AT1G09500.1	Thale cress	endoplasmic reticulum	77.02	76.31
CDY45844	Canola	cytosol, golgi, peroxisome	75.47	74.77
CDY72415	Canola	cytosol, endoplasmic reticulum, peroxisome	75.47	74.77
CDY64747	Canola	extracellular, golgi, mitochondrion, plastid	70.81	70.37
CDX94965	Canola	golgi	69.88	69.23
CDX94966	Canola	golgi, mitochondrion, peroxisome, plastid	68.94	68.94
CDX94968	Canola	endoplasmic reticulum, golgi, plastid	66.77	65.95
CDX94967	Canola	plasma membrane	65.84	65.84
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	41.93	61.93
CDY14000	Canola	cytosol	59.94	59.2
CDY64748	Canola	cytosol	68.01	58.56
CDX92530	Canola	cytosol	59.32	57.88
CDY43911	Canola	cytosol	57.45	56.92
CDY03618	Canola	cytosol	57.14	56.62
CDY65726	Canola	cytosol	57.14	56.62
GSMUA_Achr8P24060_001	Banana	plastid	56.21	56.04
CDY22576	Canola	cytosol	56.52	56.0
GSMUA_Achr8P24070_001	Banana	golgi, plastid	55.28	55.11
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	55.59	54.74
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	55.59	54.74
TraesCS5D01G540800.1	Wheat	plastid	55.59	54.24
TraesCS4A01G331900.2	Wheat	golgi, unclear	55.59	54.24
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	54.97	53.96
GSMUA_Achr8P24040_001	Banana	plastid	54.04	53.87
TraesCS5B01G547000.1	Wheat	golgi	54.97	53.64
TraesCS5B01G547200.1	Wheat	unclear	54.97	53.64
Solyc01g087640.2.1	Tomato	cytosol	54.04	53.05
TraesCS5D01G541100.1	Wheat	golgi	54.35	53.03
KXG30065	Sorghum	plastid	54.97	52.99
TraesCS4D01G343400.1	Wheat	cytosol	54.66	51.92
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	54.04	51.79
HORVU5Hr1G122150.1	Barley	plastid	55.9	50.0
TraesCS5A01G517000.1	Wheat	mitochondrion	54.66	48.75
CDY35052	Canola	cytosol	40.99	47.83
HORVU4Hr1G085100.1	Barley	cytosol	54.66	47.31
Zm00001d015956_P002	Maize	plastid	55.59	46.74
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	31.99	45.58
CDX81743	Canola	cytosol	47.2	44.71
CDY33365	Canola	cytosol	47.2	44.31
CDY52857	Canola	cytosol	46.89	44.02
CDY24810	Canola	cytosol	42.86	43.53
CDX87345	Canola	cytosol	44.72	43.37
CDY39941	Canola	cytosol	44.72	43.37
CDY63972	Canola	cytosol	44.41	43.2
CDX75502	Canola	cytosol, extracellular, plastid	42.55	42.95
CDY64860	Canola	cytosol	44.1	42.9
CDX69139	Canola	cytosol, extracellular, plastid	42.24	42.63
CDY41656	Canola	cytosol, plastid, vacuole	41.61	42.27
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	41.93	41.8
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	41.3	41.18
CDY38590	Canola	cytosol	36.02	36.14
CDX69634	Canola	cytosol	35.71	35.83
CDX96012	Canola	cytosol, nucleus, peroxisome	35.71	35.83
CDY09372	Canola	cytosol	35.09	35.2
CDY42105	Canola	cytosol, plastid	34.78	34.89
CDX84989	Canola	cytosol	34.78	34.89
CDY15830	Canola	cytosol	34.47	34.58
CDX84988	Canola	cytosol	31.37	33.11
CDY42108	Canola	cytosol	20.5	28.09

Protein Annotations

EnsemblPlants:CDY68009	EnsemblPlantsGene:GSBRNA2T00068422001	Gene3D:3.40.50.720	GO:A0A078JMJ5	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF492
PFAM:PF01370	ProteinID:CDY68009	ProteinID:CDY68009.1	SUPFAM:SSF51735	UniParc:UPI0004EF1024	UniProt:A0A078JMJ5
MapMan:35.1	:	:	:	:	:

Description

BnaAnng25870DBnaAnng25870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMJ5]

Coordinates

chrLK036757:-:3068..5518

Molecular Weight (calculated)

35481.8 Da

IEP (calculated)

5.427

GRAVY (calculated)

0.016

Length

322 amino acids

Sequence
(BLAST)

001: MNGGGKVVCV TGASGYIASW IVKLLLLRGY TVKATVRDPK DQKKTDHLLA LDGARERLQL FKASLLEEGS FEHAIDGCDA VFHTASPVKI IATDPQAELI
101: EPAVKGTINV LTTCTKVSSV KRVILTSSMA TLLSPNFPLG PNVLLDETTF SDPSVCEEEK QWYILSKTLA ENAAWTFAKD NNLDLVVMNP GLVIGPVLQP
201: TINFSVDVVI DFIKGKNTFN RKHHRLVDVR DVALAHIKAL ETPSANGRYI IDAPIVTTEE IEKILREFFP DLCIAHENED IDLNSMAYEV NVEKVKSLGI
301: EFTPTETSLR DTVLSLKEKH LV

Best Arabidopsis Sequence Match ( AT1G09500.1 )
(BLAST)

001: MADGGKVVCV TGASGYIASW IVKLLLFRGY TINATVRDPK DRKKTDHLLA LDGAKERLKL FKADLLDEGS FELAIDGCET VFHTASPVAI TVKTDPQVEL
101: INPAVNGTIN VLRTCTKVSS VKRVILTSSM AAVLAPETKL GPNDVVDETF FTNPSFAEER KQWYVLSKTL AEDAAWRFAK DNEIDLIVLN PGLVTGPILQ
201: PTLNFSVAVI VELMKGKNPF NTTHHRFVDV RDVALAHVKA LETPSANGRY IIDGPVVTIK DIENVLREFF PDLCIADRNE DITELNSVTF NVCLDKVKSL
301: GIIEFTPTET SLRDTVLSLK EKCLV

Arabidopsis Description

At1g09500/F14J9_16 [Source:UniProtKB/TrEMBL;Acc:O80533]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.