CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, extracellular

Predictor Summary:

cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, mitochondrion, plastid
Any Predictor:	cytosol, extracellular, golgi, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020019.1-P	Field mustard	extracellular, golgi	98.15	97.55
CDX94965	Canola	golgi	92.59	92.31
CDX94966	Canola	golgi, mitochondrion, peroxisome, plastid	85.49	86.02
CDX94967	Canola	plasma membrane	83.02	83.54
CDX94968	Canola	endoplasmic reticulum, golgi, plastid	81.17	80.67
AT1G09490.1	Thale cress	golgi	78.4	78.88
CDY64748	Canola	cytosol	85.49	74.06
CDY68009	Canola	cytosol, endoplasmic reticulum, golgi	70.37	70.81
AT1G09480.1	Thale cress	cytosol	78.7	69.11
CDY72415	Canola	cytosol, endoplasmic reticulum, peroxisome	67.28	67.08
CDY45844	Canola	cytosol, golgi, peroxisome	66.67	66.46
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	41.98	62.39
CDY14000	Canola	cytosol	57.41	57.06
GSMUA_Achr8P24060_001	Banana	plastid	56.17	56.35
CDX92530	Canola	cytosol	56.79	55.76
GSMUA_Achr8P24070_001	Banana	golgi, plastid	55.56	55.73
GSMUA_Achr8P24040_001	Banana	plastid	55.25	55.42
CDY65726	Canola	cytosol	55.56	55.38
CDY03618	Canola	cytosol	55.56	55.38
CDY43911	Canola	cytosol	55.25	55.08
CDY22576	Canola	cytosol	55.25	55.08
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	55.56	55.05
Solyc01g087640.2.1	Tomato	cytosol	55.25	54.57
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	54.94	54.43
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	53.7	53.05
TraesCS5D01G540800.1	Wheat	plastid	54.01	53.03
TraesCS4A01G331900.2	Wheat	golgi, unclear	54.01	53.03
TraesCS5B01G547200.1	Wheat	unclear	53.09	52.12
TraesCS5B01G547000.1	Wheat	golgi	52.78	51.82
TraesCS5D01G541100.1	Wheat	golgi	52.47	51.52
KXG30065	Sorghum	plastid	53.09	51.5
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	53.4	51.49
HORVU5Hr1G122150.1	Barley	plastid	55.25	49.72
TraesCS4D01G343400.1	Wheat	cytosol	50.62	48.38
CDY35052	Canola	cytosol	41.05	48.19
TraesCS5A01G517000.1	Wheat	mitochondrion	51.23	45.98
Zm00001d015956_P002	Maize	plastid	54.01	45.69
CDX81743	Canola	cytosol	46.91	44.71
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	31.17	44.69
HORVU4Hr1G085100.1	Barley	cytosol	50.93	44.35
CDY33365	Canola	cytosol	46.91	44.31
CDY52857	Canola	cytosol	46.6	44.02
CDY39941	Canola	cytosol	44.44	43.37
CDX87345	Canola	cytosol	44.44	43.37
CDY63972	Canola	cytosol	44.14	43.2
CDY64860	Canola	cytosol	43.83	42.9
CDY24810	Canola	cytosol	41.05	41.96
CDX75502	Canola	cytosol, extracellular, plastid	40.74	41.38
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	41.05	41.18
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	40.74	40.87
CDX69139	Canola	cytosol, extracellular, plastid	40.12	40.75
CDY41656	Canola	cytosol, plastid, vacuole	39.51	40.38
CDY38590	Canola	cytosol	38.58	38.94
CDX69634	Canola	cytosol	38.27	38.63
CDX96012	Canola	cytosol, nucleus, peroxisome	37.96	38.32
CDY09372	Canola	cytosol	37.04	37.38
CDY15830	Canola	cytosol	35.8	36.14
CDY42105	Canola	cytosol, plastid	35.49	35.83
CDX84989	Canola	cytosol	35.49	35.83
CDX84988	Canola	cytosol	31.48	33.44
CDY42108	Canola	cytosol	20.68	28.51

Protein Annotations

EnsemblPlants:CDY64747	EnsemblPlantsGene:GSBRNA2T00042666001	Gene3D:3.40.50.720	GO:A0A078JH63	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF492
PFAM:PF01370	ProteinID:CDY64747	ProteinID:CDY64747.1	SUPFAM:SSF51735	UniParc:UPI0004EEE737	UniProt:A0A078JH63
MapMan:35.1	:	:	:	:	:

Description

BnaA06g37870DBnaA06g37870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JH63]

Coordinates

chrLK034541:-:9148..10957

Molecular Weight (calculated)

35832.7 Da

IEP (calculated)

4.871

GRAVY (calculated)

0.114

Length

324 amino acids

Sequence
(BLAST)

001: MNGGGKVVCV TGASGYIASW IVKLLLLRGY TVRATVRNPT DTAKTEHLLA LEGAKERLKL FKADLLEECS FEQAIEGCDA VFHTASPYIV TDPQTELIDP
101: AVKGTINVLN TCKKTSSVKR VILTSSTAAV LVRPLEPNDV VDETFFSDPS VCTELKLWYP LSKTLAENAA WQFTKDNGMD MVVIIPGFVI GPLLQPTLNF
201: SVGFIVDMIN GKNPFNCINY RFVDVRDVAL AHVKALETPS ANGRYLIDGP SMMTIYEIRE TMRELFPDLC IADMNGESEM KDIMTKEIIY EVCVEKVKNL
301: GIEFTPLKSS LTDTIISLKD KCLL

Best Arabidopsis Sequence Match ( AT1G09480.1 )
(BLAST)

001: MMHEMAYKVC VEKVKSLGIE FTTPIEETLR DTIVSLMEDY KERSKEIMNG GGKLVCVTGA SGYIASWIVK LLLLRGYTVK ATVRDLTDRK KTEHLLALDG
101: AKERLKLFKA DLLEESSFEQ AIEGCDAVFH TASPVFFTVK DPQTELIDPA LKGTMNVLNT CKETPSVRRV ILTSSTAAVL FRQPPVEASD VVDETFFSDP
201: SLCRETKNWY PLSKILAENA AWEFAKDNGI DMVVLNPGFI FGPLLQPTLN FSVELIVDFI NGKNPFNSRF YRFVDVRDVA LAHIKALETP SANGRYIIDG
301: PIMSVSDIID ILRELLPDLC IADTNEESVM NEMLCKVCVE KVKNLGVEFT PMKSSLRDTI VSLKEKCLL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.