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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35052 Canola cytosol 79.01 98.19
CDY52857 Canola cytosol 97.67 97.67
CDX81743 Canola cytosol 96.5 97.35
AT1G15950.1 Thale cress cytosol 96.5 96.22
CDY63972 Canola cytosol 81.63 84.59
CDY64860 Canola cytosol 81.34 84.29
CDX87345 Canola cytosol 81.34 84.04
CDY39941 Canola cytosol 80.47 83.13
VIT_09s0070g00240.t01 Wine grape cytosol 78.72 79.88
PGSC0003DMT400051049 Potato endoplasmic reticulum, peroxisome, plastid 76.68 79.22
PGSC0003DMT400073398 Potato cytosol, endoplasmic reticulum, mitochondrion, plastid 74.93 77.41
Solyc03g116910.2.1 Tomato endoplasmic reticulum, peroxisome, plastid 74.64 77.11
Solyc06g068440.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plastid 74.34 76.81
KRH47350 Soybean cytosol 73.47 75.9
KRH09656 Soybean cytosol 74.05 75.6
KRH44552 Soybean cytosol 72.89 75.08
KRH23636 Soybean cytosol 72.3 73.37
GSMUA_Achr5P04460_001 Banana cytosol, peroxisome, plastid 69.39 70.83
TraesCS5A01G225100.3 Wheat cytosol, plastid 71.14 70.11
GSMUA_Achr11P... Banana plastid 67.35 69.37
GSMUA_Achr11P... Banana cytosol 67.64 69.25
TraesCS5D01G232400.1 Wheat cytosol, peroxisome, plastid 70.55 68.95
TraesCS5B01G223700.2 Wheat cytosol 71.43 68.63
TraesCS7D01G150500.1 Wheat cytosol 67.93 68.33
HORVU7Hr1G030380.2 Barley cytosol 67.64 68.04
TraesCS7A01G149000.1 Wheat cytosol 67.93 67.54
TraesCS7D01G150600.1 Wheat cytosol 67.06 67.06
EER89338 Sorghum cytosol 67.64 67.05
Os09t0419200-01 Rice cytosol 69.68 66.95
HORVU7Hr1G022220.4 Barley cytosol 66.18 66.76
Os08t0441500-01 Rice cytosol, peroxisome, plastid 69.68 66.2
Zm00001d045101_P001 Maize cytosol 65.31 65.88
EES15061 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 71.14 65.24
Zm00001d019669_P001 Maize cytosol 64.43 64.81
OQU89100 Sorghum cytosol 64.72 64.16
HORVU0Hr1G013070.1 Barley cytosol 64.14 64.14
HORVU5Hr1G065330.5 Barley cytosol, peroxisome, plastid 70.55 64.02
TraesCS7B01G052700.1 Wheat plastid 67.06 62.33
Os09t0127300-01 Rice cytosol 62.68 61.96
TraesCS5D01G073300.1 Wheat cytosol 60.06 61.31
Zm00001d050417_P001 Maize cytosol 64.72 61.16
TraesCS5B01G069600.1 Wheat cytosol, mitochondrion, peroxisome 59.77 61.01
TraesCS5A01G061600.1 Wheat cytosol, mitochondrion, peroxisome 59.48 60.71
TraesCS5A01G163400.1 Wheat cytosol 62.97 60.5
HORVU5Hr1G050940.1 Barley cytosol 62.97 60.34
TraesCS5D01G168400.1 Wheat cytosol 62.68 60.22
TraesCS5B01G069500.1 Wheat cytosol 59.18 59.88
TraesCS5D01G073400.1 Wheat cytosol 59.18 59.88
TraesCS7B01G052600.1 Wheat cytosol 68.51 59.8
Zm00001d032152_P001 Maize cytosol 70.55 59.31
TraesCS5B01G160700.1 Wheat cytosol 62.97 59.18
Os08t0277200-01 Rice plastid 58.89 59.06
TraesCS5A01G061700.1 Wheat cytosol 58.31 59.0
EES04640 Sorghum golgi, plastid 55.69 55.69
Zm00001d015513_P001 Maize golgi, peroxisome, plastid, vacuole 55.98 55.49
TraesCS6D01G136600.2 Wheat extracellular, vacuole 55.39 55.23
Os02t0180700-01 Rice extracellular 54.52 54.36
HORVU5Hr1G016690.3 Barley cytosol 56.85 54.02
HORVU6Hr1G028980.18 Barley endoplasmic reticulum, extracellular 54.23 53.91
HORVU5Hr1G016620.2 Barley cytosol 56.56 53.89
CDY14000 Canola cytosol 47.81 50.31
TraesCS5A01G061800.1 Wheat cytosol 40.82 50.18
TraesCS6B01G175600.2 Wheat plastid 55.69 49.87
CDX92530 Canola cytosol 47.81 49.7
CDY22576 Canola cytosol 46.94 49.54
CDY43911 Canola cytosol 46.65 49.23
CDY03618 Canola cytosol 46.36 48.92
CDY65726 Canola cytosol 46.36 48.92
CDY68009 Canola cytosol, endoplasmic reticulum, golgi 44.31 47.2
CDY64747 Canola extracellular, golgi, mitochondrion, plastid 44.31 46.91
CDX94965 Canola golgi 43.73 46.15
CDY72415 Canola cytosol, endoplasmic reticulum, peroxisome 43.73 46.15
CDY57397 Canola cytosol, endoplasmic reticulum, peroxisome 43.44 46.13
CDX94966 Canola golgi, mitochondrion, peroxisome, plastid 43.15 45.96
CDY32979 Canola cytosol, endoplasmic reticulum, peroxisome 43.15 45.82
CDX94967 Canola plasma membrane 42.57 45.34
CDY45844 Canola cytosol, golgi, peroxisome 42.86 45.23
CDX94968 Canola endoplasmic reticulum, golgi, plastid 42.86 45.09
TraesCS6A01G147300.1 Wheat cytosol, endoplasmic reticulum, peroxisome 55.39 44.6
CDX69634 Canola cytosol 39.65 42.37
CDY38590 Canola cytosol 39.65 42.37
CDX75502 Canola cytosol, extracellular, plastid 39.36 42.32
CDX69139 Canola cytosol, extracellular, plastid 39.36 42.32
CDY24810 Canola cytosol 38.48 41.64
CDY41656 Canola cytosol, plastid, vacuole 38.48 41.64
CDX96012 Canola cytosol, nucleus, peroxisome 38.78 41.43
CDY09372 Canola cytosol 37.9 40.5
CDY64748 Canola cytosol 44.02 40.37
CDY15830 Canola cytosol 37.32 39.88
CDY42105 Canola cytosol, plastid 36.15 38.63
CDX84989 Canola cytosol 35.86 38.32
CDX84988 Canola cytosol 31.49 35.41
CDY42108 Canola cytosol 21.87 31.91
HORVU5Hr1G016670.3 Barley plastid 1.75 14.29
Protein Annotations
EnsemblPlants:CDY33365EnsemblPlantsGene:GSBRNA2T00054210001Gene3D:3.40.50.720GO:A0A078H3X6GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfncoils:CoilPANTHER:PTHR10366
PANTHER:PTHR10366:SF404PFAM:PF01370ProteinID:CDY33365ProteinID:CDY33365.1SEG:segSUPFAM:SSF51735
UniParc:UPI0004EE6C2EUniProt:A0A078H3X6MapMan:21.6.1.5:::
Description
BnaC05g12180DBnaC05g12180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3X6]
Coordinates
chrLK032312:-:269969..273682
Molecular Weight (calculated)
37557.8 Da
IEP (calculated)
5.999
GRAVY (calculated)
-0.290
Length
343 amino acids
Sequence
(BLAST)
001: MPVDESSPAG KTVCVTGAGG YIASWIVKLL LERGYTVKGT VRNPDDPKNT HLRELEGAKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LEFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLFHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESAFHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLPPPPPPST SQESSQNGIK IES
Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.