Factsheet for TraesCS7B01G052700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
nucleus 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G030380.2	Barley	cytosol	88.62	95.89
Zm00001d045101_P001	Maize	cytosol	76.96	83.53
TraesCS7B01G052600.1	Wheat	cytosol	88.08	82.7
EER89338	Sorghum	cytosol	76.69	81.79
CDY35052	Canola	cytosol	53.93	72.1
TraesCS5B01G223700.2	Wheat	cytosol	69.65	71.99
VIT_09s0070g00240.t01	Wine grape	cytosol	65.31	71.3
GSMUA_Achr5P04460_001	Banana	cytosol, peroxisome, plastid	64.23	70.54
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	62.87	69.88
GSMUA_Achr11P...	Banana	cytosol	63.14	69.55
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	62.33	69.28
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	62.33	69.28
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	61.79	68.67
KRH47350	Soybean	cytosol	61.52	68.37
CDX81743	Canola	cytosol	62.87	68.24
KRH44552	Soybean	cytosol	61.25	67.87
Bra026737.1-P	Field mustard	cytosol	62.87	67.64
CDY52857	Canola	cytosol	62.87	67.64
Bra026090.1-P	Field mustard	cytosol	62.33	67.45
CDY33365	Canola	cytosol	62.33	67.06
KRH09656	Soybean	cytosol	60.7	66.67
AT1G15950.1	Thale cress	cytosol	62.06	66.57
CDY63972	Canola	cytosol	58.81	65.56
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	58.81	65.36
KRH23636	Soybean	cytosol	59.62	65.09
CDX87345	Canola	cytosol	58.54	65.06
Bra035150.1-P	Field mustard	cytosol	58.54	65.06
Bra008438.1-P	Field mustard	cytosol	58.27	64.95
CDY64860	Canola	cytosol	58.27	64.95
CDY39941	Canola	cytosol	58.27	64.76
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	56.91	62.5
TraesCS5B01G069500.1	Wheat	cytosol	56.64	61.65
TraesCS5B01G160700.1	Wheat	cytosol	56.37	56.99
TraesCS6B01G420900.1	Wheat	peroxisome	52.3	56.27
TraesCS6B01G420000.1	Wheat	cytosol	51.22	54.78
TraesCS6B01G420200.1	Wheat	cytosol	50.68	54.2
TraesCS6B01G420500.1	Wheat	cytosol	47.97	52.37
TraesCS6B01G175600.2	Wheat	plastid	53.39	51.44
TraesCS5B01G414300.1	Wheat	cytosol	46.61	51.34
TraesCS5B01G414500.1	Wheat	mitochondrion, plastid	45.8	46.43
TraesCS5B01G547200.1	Wheat	unclear	39.3	43.94
TraesCS5B01G486500.1	Wheat	cytosol	39.02	43.64
TraesCS5B01G547000.1	Wheat	golgi	38.21	42.73
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	36.86	41.34
TraesCS3B01G036600.1	Wheat	cytosol	36.86	41.34
TraesCS3B01G380500.1	Wheat	cytosol	36.59	41.28
TraesCS3B01G380600.1	Wheat	cytosol	35.77	40.0
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	24.12	39.38
TraesCS5B01G271500.1	Wheat	mitochondrion	35.5	37.64

Protein Annotations

EnsemblPlants:TraesCS7B01G052700.1	EnsemblPlantsGene:TraesCS7B01G052700	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF404	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr7B:-:55065321..55067137

Molecular Weight (calculated)

39904.9 Da

IEP (calculated)

8.585

GRAVY (calculated)

-0.079

Length

369 amino acids

Sequence
(BLAST)

001: MTVGGEATAT GRGQTVCVTG AGGYIGSWIV KLLLAKGYAV RGTVRNPGTY YMSCVYIRRR QRRRRRINLC THADDAKNAH LRGLAGAAER LVLCKADLLD
101: GDALRAAIAG CHGVFHTASP VTDDPEEMVE PAVRGTSYVI DAAAESGTVR RVVLTSSIGA VAMDPNRARD AVVDESCWSD LEFCKKTKNW YCYGKTVAER
201: EAWEAAAARG VDLVVVNPVL VQGPALQPAV NASLTHVLKY LDGSAKTYAN AVQAYVHVHD TAAAHVLVFE APAAAGRYLC VADGAVLHRE DVVTILRKFF
301: PEYPIPSRCS DSVNPRKQPY KMSNKRLREL GLEFTPVAQC LYDTVVSFQE KGILPAPPAS AQPAMKEIN

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.