Factsheet for TraesCS6B01G420900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

mitochondrion 2
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G369500.1	Wheat	peroxisome	91.55	91.81
TraesCS6A01G380800.1	Wheat	cytosol	78.72	79.41
Os02t0808800-01	Rice	cytosol	74.34	75.44
Os02t0811400-00	Rice	cytosol	73.76	75.07
TraesCS6B01G420200.1	Wheat	cytosol	74.34	73.91
HORVU6Hr1G089350.2	Barley	cytosol, peroxisome	79.01	73.64
TraesCS6B01G420000.1	Wheat	cytosol	73.18	72.75
EES05992	Sorghum	cytosol	69.97	72.51
OQU85928	Sorghum	cytosol	71.43	71.43
TraesCS6B01G420500.1	Wheat	cytosol	68.8	69.82
Os02t0811800-01	Rice	cytosol	65.89	66.67
TraesCS5B01G414300.1	Wheat	cytosol	64.43	65.97
Zm00001d051938_P002	Maize	cytosol	70.26	65.14
Os02t0811600-00	Rice	cytosol	53.06	62.12
TraesCS5B01G414500.1	Wheat	mitochondrion, plastid	64.14	60.44
TraesCS5B01G223700.2	Wheat	cytosol	55.39	53.22
TraesCS7B01G052700.1	Wheat	plastid	56.27	52.3
TraesCS5B01G069500.1	Wheat	cytosol	49.56	50.15
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	48.98	50.0
TraesCS7B01G052600.1	Wheat	cytosol	55.98	48.85
TraesCS5B01G160700.1	Wheat	cytosol	49.56	46.58
TraesCS6B01G175600.2	Wheat	plastid	47.52	42.56
TraesCS5B01G547200.1	Wheat	unclear	40.23	41.82
TraesCS5B01G486500.1	Wheat	cytosol	38.78	40.3
TraesCS5B01G547000.1	Wheat	golgi	38.48	40.0
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	37.03	38.6
TraesCS3B01G380500.1	Wheat	cytosol	36.44	38.23
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	25.07	38.05
TraesCS3B01G380600.1	Wheat	cytosol	35.86	37.27
TraesCS5B01G271500.1	Wheat	mitochondrion	37.03	36.49
TraesCS3B01G036600.1	Wheat	cytosol	34.4	35.87

Protein Annotations

EnsemblPlants:TraesCS6B01G420900.1	EnsemblPlantsGene:TraesCS6B01G420900	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:	:

Description

No Description!

Coordinates

chr6B:-:691990593..691993051

Molecular Weight (calculated)

37763.3 Da

IEP (calculated)

7.966

GRAVY (calculated)

-0.180

Length

343 amino acids

Sequence
(BLAST)

001: MSSHSETRSN SNGERQQQQQ VCVTGAGGFI GSWVVKELLI RGYRVRGTAR EPADHKNAHL LALEGAKERL SLCRADLLDR DNLIAVFSGC HGVFHIASPI
101: SNTDPDLMVV AVEGTKNVIN AAADAGVQRV VFTSSYGAVH MDPNRSSDAV LQESCWSDYE FCKQTGNLYC CSKMMAEITA KEEAAKRGLE LVVVVPSVTI
201: GPALQQKLNL GITHIIRYVT GAKKTYPNAV AAYVDVREVA RAHVLVYERP DARGRYLCIG AVVHRADLVK LLGDLFPEYQ ITAKCEDDGK PMARPYRFSN
301: QRLRDLGLEF TPLRQTLYDT VVSLEQQGHL LLPAVPGPER ARL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.