Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05992 | Sorghum | cytosol | 84.26 | 87.31 |
| Os02t0808800-01 | Rice | cytosol | 78.72 | 79.88 |
| Os02t0811400-00 | Rice | cytosol | 77.55 | 78.93 |
| Zm00001d051938_P002 | Maize | cytosol | 82.22 | 76.22 |
| TraesCS6D01G366200.1 | Wheat | cytosol | 75.8 | 75.36 |
| TraesCS6D01G365700.1 | Wheat | cytosol | 75.51 | 75.07 |
| TraesCS6A01G381400.1 | Wheat | cytosol | 74.64 | 74.2 |
| TraesCS6B01G420200.1 | Wheat | cytosol | 74.64 | 74.2 |
| TraesCS6B01G420000.1 | Wheat | cytosol | 73.47 | 73.04 |
| Os02t0811800-01 | Rice | cytosol | 72.01 | 72.86 |
| TraesCS6B01G420500.1 | Wheat | cytosol | 71.14 | 72.19 |
| TraesCS6D01G366400.1 | Wheat | cytosol | 69.68 | 71.77 |
| TraesCS6B01G420900.1 | Wheat | peroxisome | 71.43 | 71.43 |
| TraesCS6D01G365900.1 | Wheat | cytosol | 69.97 | 71.01 |
| TraesCS6A01G380800.1 | Wheat | cytosol | 69.39 | 70.0 |
| TraesCS6D01G369500.1 | Wheat | peroxisome | 69.39 | 69.59 |
| HORVU6Hr1G089460.2 | Barley | cytosol | 71.72 | 68.91 |
| TraesCS5B01G414300.1 | Wheat | cytosol | 66.47 | 68.06 |
| TraesCS5A01G410400.1 | Wheat | cytosol | 67.06 | 68.05 |
| HORVU6Hr1G089340.1 | Barley | mitochondrion | 76.38 | 67.88 |
| TraesCS5A01G410100.1 | Wheat | cytosol | 65.6 | 67.16 |
| HORVU6Hr1G089350.2 | Barley | cytosol, peroxisome | 70.85 | 66.03 |
| TraesCS6A01G381100.1 | Wheat | cytosol | 53.64 | 65.95 |
| TraesCS6D01G366000.1 | Wheat | cytosol | 72.59 | 64.68 |
| Os02t0811600-00 | Rice | cytosol | 54.81 | 64.16 |
| TraesCS6A01G381700.1 | Wheat | golgi, mitochondrion | 69.97 | 63.66 |
| KXG32196 | Sorghum | cytosol | 60.64 | 63.61 |
| TraesCS5B01G414500.1 | Wheat | mitochondrion, plastid | 67.06 | 63.19 |
| TraesCS6A01G380900.1 | Wheat | cytosol | 69.68 | 62.24 |
| KXG32301 | Sorghum | plastid | 59.48 | 62.2 |
| EER89338 | Sorghum | cytosol | 55.39 | 54.91 |
| OQU89100 | Sorghum | cytosol | 52.19 | 51.73 |
| EES04640 | Sorghum | golgi, plastid | 50.73 | 50.73 |
| EES15061 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 53.94 | 49.47 |
| EES01693 | Sorghum | endoplasmic reticulum, golgi, plastid | 38.19 | 40.31 |
| EER99113 | Sorghum | mitochondrion | 38.48 | 40.12 |
| EER93204 | Sorghum | cytosol | 38.48 | 40.0 |
| KXG30065 | Sorghum | plastid | 38.78 | 39.82 |
| KXG37270 | Sorghum | cytosol | 37.61 | 39.33 |
| EES14250 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 38.19 | 39.1 |
| EES01692 | Sorghum | cytosol | 37.03 | 38.72 |
| EES01690 | Sorghum | cytosol | 35.86 | 37.27 |
| EES02561 | Sorghum | cytosol | 33.82 | 35.69 |
Protein Annotations
| EnsemblPlants:OQU85928 | EnsemblPlantsGene:SORBI_3004G340300 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF353 | PFAM:PF01370 |
| ProteinID:KXG31330.1 | ProteinID:OQU85926.1 | ProteinID:OQU85927.1 | ProteinID:OQU85928 | ProteinID:OQU85928.1 | SEG:seg |
| SUPFAM:SSF51735 | UniParc:UPI0007F30F14 | UniProt:A0A194YU08 | MapMan:21.6.1.5 | : | : |
Description
hypothetical protein
Coordinates
chr4:-:67209418..67213650
Molecular Weight (calculated)
37704.6 Da
IEP (calculated)
7.982
GRAVY (calculated)
-0.078
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVTMSSSS ACGDEEEEEQ QQLVCVTGAG GFIGSWVVKE LLQRGYLVRG TARNPEHGKN AHLLALDGAK ERLTLCRADV LDSASLRAAF VGCHGVFHVA
101: SPVSNDPELV PVAVEGTRNV ITAAADEGVR RVVFTSSYGA VHMDPNRSPD AVLDETCWSD YDFCKRSDNL YCCAKMMAEI TATEVAAARG LQLAVVVPCI
201: TLGPMLQQTL NVSTHHILRY VMGTKRSIPN AVAAYVDIRD VARAHVLAYE RPAARGRYLC IGTVLHRAQL VAMLRDLFPK YPVTAKCEDD GKPMVKPYRF
301: SNQRLRDLGL EFTPLRESLY ETVVCLQQKG HLPVIKQKQR ACL
101: SPVSNDPELV PVAVEGTRNV ITAAADEGVR RVVFTSSYGA VHMDPNRSPD AVLDETCWSD YDFCKRSDNL YCCAKMMAEI TATEVAAARG LQLAVVVPCI
201: TLGPMLQQTL NVSTHHILRY VMGTKRSIPN AVAAYVDIRD VARAHVLAYE RPAARGRYLC IGTVLHRAQL VAMLRDLFPK YPVTAKCEDD GKPMVKPYRF
301: SNQRLRDLGL EFTPLRESLY ETVVCLQQKG HLPVIKQKQR ACL
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.