Factsheet for TraesCS5A01G410100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G414300.1	Wheat	cytosol	93.73	93.73
TraesCS5A01G410400.1	Wheat	cytosol	88.66	87.87
Os02t0808800-01	Rice	cytosol	72.84	72.19
Os02t0811400-00	Rice	cytosol	71.64	71.22
EES05992	Sorghum	cytosol	69.25	70.09
TraesCS6A01G381400.1	Wheat	cytosol	70.15	68.12
OQU85928	Sorghum	cytosol	67.16	65.6
TraesCS6A01G380800.1	Wheat	cytosol	66.57	65.59
Os02t0811800-01	Rice	cytosol	65.37	64.6
Zm00001d051938_P002	Maize	cytosol	70.15	63.51
TraesCS6A01G381100.1	Wheat	cytosol	52.24	62.72
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	66.87	59.42
Os02t0811600-00	Rice	cytosol	51.94	59.39
TraesCS6A01G380900.1	Wheat	cytosol	67.46	58.85
TraesCS7A01G149000.1	Wheat	cytosol	50.75	49.28
TraesCS5A01G225100.3	Wheat	cytosol, plastid	50.45	48.56
TraesCS5A01G061700.1	Wheat	cytosol	48.36	47.79
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	46.87	46.73
TraesCS5A01G163400.1	Wheat	cytosol	48.66	45.66
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	27.46	42.2
TraesCS5A01G061800.1	Wheat	cytosol	34.33	41.22
TraesCS4A01G331900.2	Wheat	golgi, unclear	37.31	37.88
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	47.46	37.32
TraesCS3A01G046700.1	Wheat	cytosol	36.12	36.78
TraesCS5A01G473600.1	Wheat	cytosol	35.82	36.36
TraesCS3A01G348600.1	Wheat	cytosol	35.22	35.98
TraesCS5A01G517000.1	Wheat	mitochondrion	38.21	35.46
TraesCS5A01G271200.1	Wheat	mitochondrion	35.52	34.2
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	36.42	32.45

Protein Annotations

EnsemblPlants:TraesCS5A01G410100.1	EnsemblPlantsGene:TraesCS5A01G410100	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr5A:+:599390819..599392871

Molecular Weight (calculated)

37726.1 Da

IEP (calculated)

8.258

GRAVY (calculated)

-0.332

Length

335 amino acids

Sequence
(BLAST)

001: MANNSSADKQ RTQELVCVTG AGGFIGSWVV KELLHRGYRV RGTARDPADR KNIHLHTLEG ADERLSLRRA DVLDYDSLRA AFDGCNGVFH VASPVSNDVE
101: LMPVAVEGTR NVVNAAADMG IRRLVYTSSY GTVHMNPNRS PDTILDETCW SDYEFCKQTG NYYCCAKMMA EMAATEEATR RGLQLAVVVP PMTIGPMLQR
201: SLNASNYHVA RYLMGTKKAY PNAVAIYTDV RDVVHAHLLV YEHHHARGRY LCFGTALQRS CLLQLIRGPF PHYPITSKCE ENDKSMANPY RFSNQRLEDL
301: GLEFTDIRRT LYETVICLQQ KGHVRTIVPY QRSSL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.