Factsheet for TraesCS3A01G348600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G380500.1	Wheat	cytosol	96.95	97.25
TraesCS3D01G342200.2	Wheat	cytosol	97.87	93.59
HORVU3Hr1G088020.2	Barley	cytosol	93.29	93.58
EES01692	Sorghum	cytosol	73.78	73.78
Os01t0828100-00	Rice	plasma membrane	51.22	72.41
Zm00001d043013_P001	Maize	cytosol	50.91	66.53
TraesCS5A01G473600.1	Wheat	cytosol	52.13	51.82
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	29.88	44.95
TraesCS5A01G225100.3	Wheat	cytosol, plastid	43.29	40.8
TraesCS4A01G331900.2	Wheat	golgi, unclear	40.85	40.61
TraesCS5A01G061700.1	Wheat	cytosol	40.24	38.94
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	39.33	38.39
TraesCS7A01G149000.1	Wheat	cytosol	40.24	38.26
TraesCS5A01G410400.1	Wheat	cytosol	39.33	38.17
TraesCS6A01G380800.1	Wheat	cytosol	38.41	37.06
TraesCS3A01G046700.1	Wheat	cytosol	35.98	35.87
TraesCS5A01G517000.1	Wheat	mitochondrion	39.02	35.46
TraesCS6A01G381400.1	Wheat	cytosol	37.2	35.36
TraesCS5A01G163400.1	Wheat	cytosol	38.41	35.29
TraesCS5A01G410100.1	Wheat	cytosol	35.98	35.22
TraesCS6A01G381100.1	Wheat	cytosol	29.57	34.77
TraesCS5A01G271200.1	Wheat	mitochondrion	35.37	33.33
TraesCS5A01G061800.1	Wheat	cytosol	27.44	32.26
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	36.89	32.1
TraesCS6A01G380900.1	Wheat	cytosol	36.28	30.99
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	34.15	29.79
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	37.2	28.64

Protein Annotations

EnsemblPlants:TraesCS3A01G348600.1	EnsemblPlantsGene:TraesCS3A01G348600	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF553	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3A:+:597266896..597268555

Molecular Weight (calculated)

35798.3 Da

IEP (calculated)

4.963

GRAVY (calculated)

0.028

Length

328 amino acids

Sequence
(BLAST)

001: MALAGGDARG ELVCVTGGSG FVGSWLVRLL LDRGYTVHAT VQNLQDEGET KHLQALDGAD TRLRLFQMDL LDPASVRPAV EGVHGVFHLA SPVILQPAQD
101: PENELLLPAV NGALNVLRAA RDSGVKRVVM VSSQTAMCPT TADWPAGKVI DDDCWADVEI LKKLELWYNV SKTLAEKAAW DFAGEEGLQL VVLNPGLVLG
201: PTLTPAPTGS LRLLMLLLGG QKLDMEPFFV GCVDVRDVAQ SLVVLYENPS AQGRHLCMES AVRLVDFHDE LANLYPEFPV HRIQEDKQGW VVRSKAPSKK
301: LIDLGVRFTP FDKTVRDTVD CLRSKGEI

Best Arabidopsis Sequence Match ( AT1G09480.2 )
(BLAST)

001: MNGGGKLVCV TGASGYIASW IVKLLLLRGY TVKATVRDLT DRKKTEHLLA LDGAKERLKL FKADLLEESS FEQAIEGCDA VFHTASPVFF TVKDPQTELI
101: DPALKGTMNV LNTCKETPSV RRVILTSSTA AVLFRQPPVE ASDVVDETFF SDPSLCRETK NWYPLSKILA ENAAWEFAKD NGIDMVVLNP GFIFGPLLQP
201: TLNFSVELIV DFINGKNPFN SRFYRFVDVR DVALAHIKAL ETPSANGRYI IDGPIMSVSD IIDILRELLP DLCIADTNEE SVMNEMLCKV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.