Factsheet for HORVU3Hr1G088020.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, peroxisome, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi, plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G380500.1	Wheat	cytosol	93.58	93.58
TraesCS3A01G348600.1	Wheat	cytosol	93.58	93.29
TraesCS3D01G342200.2	Wheat	cytosol	92.97	88.63
EES01692	Sorghum	cytosol	75.23	75.0
Os01t0828100-00	Rice	plasma membrane	51.38	72.41
Zm00001d043013_P001	Maize	cytosol	50.76	66.14
HORVU5Hr1G112340.7	Barley	cytosol, plastid	51.07	44.53
HORVU7Hr1G022220.4	Barley	cytosol	44.34	42.65
HORVU7Hr1G030380.2	Barley	cytosol	41.59	39.88
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	44.04	38.1
HORVU0Hr1G013070.1	Barley	cytosol	38.84	37.03
HORVU5Hr1G122150.1	Barley	plastid	40.37	36.67
HORVU5Hr1G050940.1	Barley	cytosol	39.76	36.31
HORVU6Hr1G028980.18	Barley	endoplasmic reticulum, extracellular	38.23	36.23
HORVU4Hr1G085100.1	Barley	cytosol	40.98	36.02
HORVU6Hr1G089460.2	Barley	cytosol	37.61	34.45
HORVU5Hr1G016620.2	Barley	cytosol	37.0	33.61
HORVU5Hr1G016690.3	Barley	cytosol	37.0	33.52
HORVU6Hr1G089350.2	Barley	cytosol, peroxisome	37.31	33.15
HORVU6Hr1G089340.1	Barley	mitochondrion	38.23	32.38
HORVU3Hr1G004270.1	Barley	mitochondrion	19.88	27.08
HORVU5Hr1G016670.3	Barley	plastid	0.31	2.38

Protein Annotations

EMBL:AK355180	EMBL:AK367741	EnsemblPlants:HORVU3Hr1G088020.2	EnsemblPlantsGene:HORVU3Hr1G088020	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF553	PFAM:PF01370	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002004E4D	UniProt:F2CU78
MapMan:35.1	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CU78]

Coordinates

chrchr3H:+:623328731..623330742

Molecular Weight (calculated)

35807.4 Da

IEP (calculated)

4.876

GRAVY (calculated)

0.046

Length

327 amino acids

Sequence
(BLAST)

001: MALAGGDSGG ELVCVTGGSG FIGSWLVRLL LDRGYTVHAT VQNLQDEGET KHLQALDGAA TRLRLFQMDL LDPASVRPAI EGVHGVFHLA SPVILQPAQD
101: PENELLLPAV NGALNVLRAA KDSGVKRVVM VSSQTAMCPN PDWPADKVID DDSWADPEIL KKLELWYNVS KTLAEKAAWD FVREEGLQLV VLNPGLVLGP
201: TLTPVATASL RLLMLLLEGQ KLDMELFFIG CVDVRDVAQS LVVLYESPSA QGRHLCMESA VRLVDFHDEL ANLCPEFPVH RIQEDKQGWV VRSKAPSKKL
301: IDLGVRFTPF DKTVRDTVDC LRSKGEI

Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)

001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.