Factsheet for HORVU5Hr1G112340.7

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G486300.2	Wheat	cytosol	85.6	97.27
TraesCS5B01G486500.1	Wheat	cytosol	85.07	96.67
TraesCS5A01G473600.1	Wheat	cytosol	85.07	96.67
EER93204	Sorghum	cytosol	73.07	83.03
Os03t0818200-01	Rice	cytosol	73.6	82.63
KXG37270	Sorghum	cytosol	68.53	78.35
Zm00001d012980_P001	Maize	cytosol	65.6	74.32
Zm00001d012982_P001	Maize	cytosol	72.53	72.92
GSMUA_Achr4P18740_001	Banana	cytosol, extracellular, plastid	59.73	70.22
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	56.27	65.33
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	56.27	65.33
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	56.0	65.02
VIT_06s0004g07130.t01	Wine grape	cytosol	56.8	64.74
KRH72740	Soybean	cytosol	55.2	64.69
PGSC0003DMT400065273	Potato	cytosol	54.4	62.96
Solyc11g072510.1.1	Tomato	cytosol, extracellular	53.87	62.35
AT5G58490.1	Thale cress	cytosol	53.6	62.04
KRH30171	Soybean	nucleus	48.8	57.01
KRH17091	Soybean	cytosol, golgi, plastid	54.67	56.94
KRG98212	Soybean	endoplasmic reticulum	47.73	55.76
HORVU3Hr1G088020.2	Barley	cytosol	44.53	51.07
Zm00001d012981_P002	Maize	cytosol	52.27	44.24
HORVU7Hr1G022220.4	Barley	cytosol	38.13	42.06
HORVU7Hr1G030380.2	Barley	cytosol	37.6	41.35
HORVU5Hr1G122150.1	Barley	plastid	38.4	40.0
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	39.2	38.89
HORVU0Hr1G013070.1	Barley	cytosol	35.2	38.48
HORVU4Hr1G085100.1	Barley	cytosol	37.33	37.63
HORVU6Hr1G089460.2	Barley	cytosol	35.73	37.53
HORVU6Hr1G028980.18	Barley	endoplasmic reticulum, extracellular	34.4	37.39
HORVU6Hr1G089350.2	Barley	cytosol, peroxisome	36.0	36.68
HORVU5Hr1G050940.1	Barley	cytosol	33.33	34.92
HORVU5Hr1G016690.3	Barley	cytosol	33.6	34.9
HORVU5Hr1G016620.2	Barley	cytosol	33.33	34.72
HORVU6Hr1G089340.1	Barley	mitochondrion	35.73	34.72
HORVU3Hr1G004270.1	Barley	mitochondrion	21.87	34.17
HORVU5Hr1G016670.3	Barley	plastid	0.27	2.38

Protein Annotations

EnsemblPlants:HORVU5Hr1G112340.7	EnsemblPlantsGene:HORVU5Hr1G112340	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0050662
InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF369	PFAM:PF01370	SEG:seg
SUPFAM:SSF51735	UniParc:UPI000B4618D0	UniProt:A0A287SRA8	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:-:638927339..638929940

Molecular Weight (calculated)

39977.9 Da

IEP (calculated)

5.921

GRAVY (calculated)

0.045

Length

375 amino acids

Sequence
(BLAST)

001: GSGSHLPHHS IAVHSYTSSP FLITWGGQSP SPQSTTPHTL TTGTEEMATG GGEAKGETVL VTGASGFIGS VTVRLLLARG YSVHAAVLNP DDKAETEHLL
101: ALAGGDEARV RFFPCDLLDG AAMLAAARGC SGVFHLASPC TVDRVLDPQE LVVPAVEGTL NVLRAAKDAG GVRRVVVTSS VSAVVPSPGW PAGEVLDERC
201: WTDIDYCDKN GVWYPASKTL AEKAAWKFAE ENGLDVVVVN PGTVLGPMIP PRINASMAMF LRLLEGCTEE YKDFFIGPVH VEDVALAHIT LFENPSASGR
301: HLCVEPICHW SDFASKVAEL YPNYKVPKFP KDTQPGLVRA EGVPKKLMAL GLQFTPLEKI IRDAVESLRS RGCIA

Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)

001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.