Factsheet for GSMUA_Achr4P18740_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

cytosol 2
plastid 2
extracellular 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g07130.t01	Wine grape	cytosol	76.18	73.86
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	74.29	73.37
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	74.29	73.37
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	73.35	72.45
KRH72740	Soybean	cytosol	72.41	72.19
AT5G58490.1	Thale cress	cytosol	71.16	70.06
Solyc11g072510.1.1	Tomato	cytosol, extracellular	71.16	70.06
PGSC0003DMT400065273	Potato	cytosol	70.85	69.75
Os03t0818200-01	Rice	cytosol	72.41	69.16
TraesCS5B01G486500.1	Wheat	cytosol	70.85	68.48
TraesCS5A01G473600.1	Wheat	cytosol	70.53	68.18
TraesCS5D01G486300.2	Wheat	cytosol	70.53	68.18
KXG37270	Sorghum	cytosol	67.4	65.55
EER93204	Sorghum	cytosol	67.4	65.15
Zm00001d012980_P001	Maize	cytosol	66.14	63.75
KRH17091	Soybean	cytosol, golgi, plastid	71.47	63.33
KRG98212	Soybean	endoplasmic reticulum	63.64	63.24
KRH30171	Soybean	nucleus	63.64	63.24
HORVU5Hr1G112340.7	Barley	cytosol, plastid	70.22	59.73
Zm00001d012982_P001	Maize	cytosol	68.34	58.45
GSMUA_Achr8P29060_001	Banana	cytosol	52.04	49.55
GSMUA_Achr8P24070_001	Banana	golgi, plastid	47.02	46.44
GSMUA_Achr8P24060_001	Banana	plastid	46.4	45.82
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	46.71	45.43
GSMUA_Achr8P24040_001	Banana	plastid	45.77	45.2
GSMUA_Achr11P...	Banana	plastid	44.2	42.34
GSMUA_Achr5P04460_001	Banana	cytosol, peroxisome, plastid	44.51	42.26
GSMUA_Achr11P...	Banana	cytosol	44.2	42.09
GSMUA_AchrUn_...	Banana	cytosol	42.01	41.23
GSMUA_Achr6P09630_001	Banana	cytosol	39.19	39.06
Zm00001d012981_P002	Maize	cytosol	53.29	38.37

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0050662
EnsemblPlantsGene:GSMUA_Achr4G18740_001	EnsemblPlants:GSMUA_Achr4P18740_001	EnsemblPlants:GSMUA_Achr4T18740_001	UniProt:M0SQ37	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370
PRINTS:PR00081	PANTHER:PTHR10366	PANTHER:PTHR10366:SF369	InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI000295B477

Description

Putative Dihydroflavonol-4-reductase [Source:GMGC_GENE;Acc:GSMUA_Achr4G18740_001]

Coordinates

chr4:+:19739670..19743696

Molecular Weight (calculated)

34657.9 Da

IEP (calculated)

5.586

GRAVY (calculated)

0.082

Length

319 amino acids

Sequence
(BLAST)

001: MSSVVCVTGG SGFIGSWLVR LLLDRGYAVH ATVMHLGDEA ETAHLRALEG AAERLQLFEI DLLDPASLLA AIRGSAGVFH LASPCTVNRV HDPQTELLDP
101: AVKGTLNVLR AAKESGVGRV VVTSSISAIF PSPGWPADVV KDESCWTDLE YCRQNELWYP ASKTLAEKAA WEFAKGNGLD VVVVNPGTVM GPIIPPAINA
201: SMTMLMRLLQ GCTDEYPDFY MGSVHVKDVA LAHILLYENP SATGRHLCVE AISHWSDFAS KVAELFPDYK VPRLPKDTQP GLLRAQNPAK KLIELGMEFT
301: SMEQIIKDAV ESLKSKGYI

Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)

001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.