CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012982_P001	Maize	cytosol	93.33	82.57
TraesCS5D01G486300.2	Wheat	cytosol	82.42	82.42
TraesCS5B01G486500.1	Wheat	cytosol	82.12	82.12
Os03t0818200-01	Rice	cytosol	82.73	81.74
TraesCS5A01G473600.1	Wheat	cytosol	81.21	81.21
KXG37270	Sorghum	cytosol	78.48	78.96
HORVU5Hr1G112340.7	Barley	cytosol, plastid	83.03	73.07
GSMUA_Achr4P18740_001	Banana	cytosol, extracellular, plastid	65.15	67.4
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	61.52	62.85
KRH72740	Soybean	cytosol	60.91	62.81
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	61.21	62.54
PGSC0003DMT400065273	Potato	cytosol	61.21	62.35
AT5G58490.1	Thale cress	cytosol	60.91	62.04
VIT_06s0004g07130.t01	Wine grape	cytosol	61.82	62.01
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	60.61	61.92
Solyc11g072510.1.1	Tomato	cytosol, extracellular	60.61	61.73
KRH30171	Soybean	nucleus	53.94	55.45
KRH17091	Soybean	cytosol, golgi, plastid	60.3	55.28
KRG98212	Soybean	endoplasmic reticulum	52.73	54.21
EES01693	Sorghum	endoplasmic reticulum, golgi, plastid	49.39	50.15
EES01692	Sorghum	cytosol	48.48	48.78
EES01690	Sorghum	cytosol	46.97	46.97
KXG32301	Sorghum	plastid	40.91	41.16
EER89338	Sorghum	cytosol	42.42	40.46
KXG30065	Sorghum	plastid	40.61	40.12
EES05992	Sorghum	cytosol	40.0	39.88
OQU89100	Sorghum	cytosol	40.91	39.02
KXG32196	Sorghum	cytosol	38.18	38.53
OQU85928	Sorghum	cytosol	40.0	38.48
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	43.03	37.97
EES04640	Sorghum	golgi, plastid	38.79	37.32
EER99113	Sorghum	mitochondrion	36.97	37.08
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	37.27	36.72
EES02561	Sorghum	cytosol	36.06	36.62

Protein Annotations

EnsemblPlants:EER93204	EnsemblPlantsGene:SORBI_3001G037900	EntrezGene:8057379	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF369
PFAM:PF01370	ProteinID:EER93204	ProteinID:EER93204.1	RefSeq:XP_002466206.1	SEG:seg	SUPFAM:SSF51735
unigene:Sbi.9335	UniParc:UPI0001A829EB	UniProt:C5WV45	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr1:-:2819328..2822168

Molecular Weight (calculated)

35340.5 Da

IEP (calculated)

5.403

GRAVY (calculated)

0.028

Length

330 amino acids

Sequence
(BLAST)

001: MASGEQGKGE TVLVTGASGF IGSTLVRGLL GRGYNVRAGV LNPDDRAETD HLLDLAAGAG DGRLSFFRCD LLDGAALLDA ARGCSGIFHL ASPCTVDPVK
101: DPQNQLMVPA VEGTRNVVRA AKDAGGVRRV VVTSSISAMV PSPGWPAGEV LDERCWTDID YCEKNGVWYP ASKALAEKAA WKFAEENGLD VVVVNPGTVL
201: GPMIPPAINA SMAMFCRLLQ GCTEEYADFF IGPVHVEDVA MAHIMVFENP SASGRHMCVQ SICHWSDFAV KVAELYPNYK VPKFPKDTQP GLVRQEVGSK
301: KLIALGLQIT PMEKIIRDAV ESLESRGHIS

Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)

001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.