Factsheet for Bra002645.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	98.14	98.14
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	97.21	97.21
AT5G58490.1	Thale cress	cytosol	90.09	89.81
KRH72740	Soybean	cytosol	78.02	78.75
VIT_06s0004g07130.t01	Wine grape	cytosol	78.95	77.51
PGSC0003DMT400065273	Potato	cytosol	74.61	74.38
Solyc11g072510.1.1	Tomato	cytosol, extracellular	74.61	74.38
GSMUA_Achr4P18740_001	Banana	cytosol, extracellular, plastid	73.37	74.29
KRH17091	Soybean	cytosol, golgi, plastid	77.09	69.17
Os03t0818200-01	Rice	cytosol	69.35	67.07
TraesCS5D01G486300.2	Wheat	cytosol	65.63	64.24
KXG37270	Sorghum	cytosol	64.71	63.72
TraesCS5B01G486500.1	Wheat	cytosol	65.02	63.64
TraesCS5A01G473600.1	Wheat	cytosol	64.4	63.03
Zm00001d012980_P001	Maize	cytosol	63.78	62.24
EER93204	Sorghum	cytosol	62.54	61.21
HORVU5Hr1G112340.7	Barley	cytosol, plastid	65.02	56.0
Zm00001d012982_P001	Maize	cytosol	63.47	54.96
Bra026600.1-P	Field mustard	cytosol	48.92	49.22
Bra014263.1-P	Field mustard	cytosol	46.75	46.46
Bra023231.1-P	Field mustard	cytosol	46.44	46.15
Bra030440.1-P	Field mustard	cytosol	46.13	45.85
Bra002236.1-P	Field mustard	cytosol	46.75	45.76
Bra026737.1-P	Field mustard	cytosol	46.75	44.02
Bra026090.1-P	Field mustard	cytosol	45.51	43.11
Bra035150.1-P	Field mustard	cytosol	43.96	42.77
Bra020020.1-P	Field mustard	extracellular, golgi	42.11	42.24
Bra008438.1-P	Field mustard	cytosol	43.03	41.99
Bra031666.1-P	Field mustard	golgi	40.87	41.77
Bra020019.1-P	Field mustard	extracellular, golgi	40.87	40.49
Bra020021.1-P	Field mustard	golgi	40.25	40.37
Bra008822.1-P	Field mustard	cytosol	34.06	40.0
Bra038342.1-P	Field mustard	cytosol, golgi, peroxisome	39.63	39.38
Bra010535.1-P	Field mustard	cytosol	36.84	38.39
Zm00001d012981_P002	Maize	cytosol	51.7	37.7
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	37.15	37.38
Bra024747.1-P	Field mustard	extracellular	23.22	31.78
Bra024744.1-P	Field mustard	cytosol	33.44	29.75

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EnsemblPlantsGene:Bra002645	EnsemblPlants:Bra002645.1	EnsemblPlants:Bra002645.1-P	InterPro:Epimerase_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0050662	UniProt:M4CEL4	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370
PANTHER:PTHR10366	PANTHER:PTHR10366:SF369	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0002543742	SEG:seg

Description

AT5G58490 (E=9e-164) | cinnamoyl-CoA reductase family

Coordinates

chrA10:+:8407381..8408759

Molecular Weight (calculated)

35350.6 Da

IEP (calculated)

5.418

GRAVY (calculated)

-0.035

Length

323 amino acids

Sequence
(BLAST)

001: MSTEREVVCV TGASGCIGSW LVHLLLLRGY SVHATVKNLQ DEKETKHLEA LEGAATRLHL FEMDLLKYDT VSAAVNGCAG VFHLASPCIV DEVQDPEKQL
101: LDPAVKGTLN VLTAAKEAGV KRVVVTSSIS AITPSPNWPA DKIKNEDCWA DEDFCKQNGL WYPLSKTLAE KAAWEFAEEK GLDVVVVNPG TVMGPVIPPS
201: INASMLMLQR LLEGCTETYE NFFMGSVHFK DVALAHILVY ENPSAKGRHL CVEAISHYGD FVAKVAELYP NYSVPKLPRE TQPGLLRAKN AAKKLMELGL
301: EFSSMEDIIK DGVESLKSKG YIS

Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)

001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.