Factsheet for Bra026600.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
golgi 2
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09372	Canola	cytosol	97.2	97.2
AT2G02400.1	Thale cress	cytosol	88.78	89.62
VIT_12s0035g02070.t01	Wine grape	cytosol	71.34	68.77
Solyc01g102730.2.1	Tomato	cytosol, peroxisome, plastid	68.85	67.79
PGSC0003DMT400046912	Potato	cytosol, endoplasmic reticulum, plastid	40.5	62.2
KRH11704	Soybean	cytosol	63.24	61.52
GSMUA_Achr8P29060_001	Banana	cytosol	61.37	58.81
Os01t0978400-01	Rice	cytosol	55.76	54.74
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	49.22	48.92
Bra014263.1-P	Field mustard	cytosol	42.68	42.15
Bra023231.1-P	Field mustard	cytosol	42.37	41.85
Bra030440.1-P	Field mustard	cytosol	42.06	41.54
Bra002236.1-P	Field mustard	cytosol	39.88	38.79
Bra026737.1-P	Field mustard	cytosol	41.12	38.48
Bra026090.1-P	Field mustard	cytosol	40.5	38.12
Bra008438.1-P	Field mustard	cytosol	38.32	37.16
Bra035150.1-P	Field mustard	cytosol	38.01	36.75
Bra020019.1-P	Field mustard	extracellular, golgi	36.14	35.58
Bra031666.1-P	Field mustard	golgi	34.89	35.44
Bra020020.1-P	Field mustard	extracellular, golgi	35.51	35.4
Bra008822.1-P	Field mustard	cytosol	30.22	35.27
Bra020021.1-P	Field mustard	golgi	35.2	35.09
Bra038342.1-P	Field mustard	cytosol, golgi, peroxisome	34.27	33.85
Bra010535.1-P	Field mustard	cytosol	32.09	33.23
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	32.71	32.71
Bra024747.1-P	Field mustard	extracellular	22.12	30.08
Bra024744.1-P	Field mustard	cytosol	30.84	27.27

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EnsemblPlantsGene:Bra026600	EnsemblPlants:Bra026600.1	EnsemblPlants:Bra026600.1-P	InterPro:Epimerase_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0050662	UniProt:M4ECU0	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366
PANTHER:PTHR10366:SF295	SUPFAM:SSF51735	UniParc:UPI00025468C1	:	:	:

Description

AT2G02400 (E=6e-167) | cinnamoyl-CoA reductase family

Coordinates

chrA02:+:20570405..20571941

Molecular Weight (calculated)

35427.4 Da

IEP (calculated)

5.584

GRAVY (calculated)

-0.123

Length

321 amino acids

Sequence
(BLAST)

001: MAKETVCVTG ANGFIGSWII RTLLDNGYTK IHASIYPGSD PTHLLKLPRP DDTNTEIKIF EADLLDPDAI ARAVDGCAGV FHVASPCTLD PPEDPEKELV
101: EPAVKGTINV LLAANRFNVR RVVITSSISA LVTNPNWPEG KPVDESSWTD LDYCKSMQKW YPISKTLAEK AAWEFSEKHR TNVVTIHPST CLGPLLQPSL
201: NASCAVLLQL LQGSTETQEH HWLGVVHVRD VAKAHVMLFE TPEASGRFLC SNGIYQFSEF AALVSKLFPE FDVHKFDKET QPGLTPCKDA AKRLIELGMV
301: FTPVEDAVKE TVQSIRDKGF L

Best Arabidopsis Sequence Match ( AT2G02400.1 )
(BLAST)

001: MAKETVCVTG ANGFIGSWII RTLIEKGYTK IHASIYPGSD PTHLLQLPGS DSKIKIFEAD LLDSDAISRA IDGCAGVFHV ASPCTLDPPV DPEKELVEPA
101: VKGTINVLEA AKRFNVRRVV ITSSISALVP NPNWPEKVPV DESSWSDLDF CKSRQKWYPI SKTLAEKAAW EFSEKHGTNI VTIHPSTCLG PLLQPNLNAS
201: CAVLLQLLQG STETQEHHWL GVVHVKDVAK GHVMLFETPD ASGRFLCTNG IYQFSEFAAL VSKLFPEFAV HKFDKETQPG LTSCNDAAKR LIELGLVFTA
301: VEDAVKETVQ SLRDKGFL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVQ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.