Factsheet for Bra020020.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

cytosol 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94967	Canola	plasma membrane	93.79	93.79
Bra020021.1-P	Field mustard	golgi	83.85	83.85
Bra020019.1-P	Field mustard	extracellular, golgi	83.85	82.82
AT1G09490.1	Thale cress	golgi	77.64	77.64
AT1G09480.1	Thale cress	cytosol	78.26	68.29
Bra031666.1-P	Field mustard	golgi	66.77	68.04
Bra038342.1-P	Field mustard	cytosol, golgi, peroxisome	66.15	65.54
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	41.3	61.01
GSMUA_Achr8P24060_001	Banana	plastid	54.97	54.8
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	54.97	54.13
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	54.97	54.13
Solyc01g087640.2.1	Tomato	cytosol	54.97	53.96
GSMUA_Achr8P24070_001	Banana	golgi, plastid	53.73	53.56
GSMUA_Achr8P24040_001	Banana	plastid	53.11	52.94
Bra002236.1-P	Field mustard	cytosol	54.04	52.73
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	53.11	52.13
Bra014263.1-P	Field mustard	cytosol	52.48	52.0
TraesCS5D01G540800.1	Wheat	plastid	53.11	51.82
Bra023231.1-P	Field mustard	cytosol	52.17	51.69
TraesCS4A01G331900.2	Wheat	golgi, unclear	52.8	51.52
Bra030440.1-P	Field mustard	cytosol	51.86	51.38
TraesCS5B01G547200.1	Wheat	unclear	52.17	50.91
TraesCS5D01G541100.1	Wheat	golgi	51.86	50.61
TraesCS5B01G547000.1	Wheat	golgi	51.55	50.3
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	52.17	50.0
KXG30065	Sorghum	plastid	50.93	49.1
HORVU5Hr1G122150.1	Barley	plastid	54.66	48.89
TraesCS4D01G343400.1	Wheat	cytosol	49.69	47.2
TraesCS5A01G517000.1	Wheat	mitochondrion	50.93	45.43
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	31.06	44.25
Zm00001d015956_P002	Maize	plastid	52.17	43.86
HORVU4Hr1G085100.1	Barley	cytosol	50.31	43.55
Bra026090.1-P	Field mustard	cytosol	45.65	43.11
Bra026737.1-P	Field mustard	cytosol	45.65	42.86
Bra035150.1-P	Field mustard	cytosol	44.1	42.77
Bra008822.1-P	Field mustard	cytosol	36.34	42.55
Bra008438.1-P	Field mustard	cytosol	43.48	42.3
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	42.24	42.11
Bra010535.1-P	Field mustard	cytosol	39.13	40.65
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	39.44	39.56
Bra026600.1-P	Field mustard	cytosol	35.4	35.51
Bra024747.1-P	Field mustard	extracellular	23.6	32.2
Bra024744.1-P	Field mustard	cytosol	35.09	31.13

Protein Annotations

EnsemblPlants:Bra020020.1	EnsemblPlants:Bra020020.1-P	EnsemblPlantsGene:Bra020020	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF492
PFAM:PF01370	SUPFAM:SSF51735	UniParc:UPI000253E8B4	UniProt:M4DU27	MapMan:35.1	:

Description

AT1G09480 (E=7e-147) | cinnamyl-alcohol dehydrogenase family / CAD family

Coordinates

chrA06:+:3242222..3243864

Molecular Weight (calculated)

35431.1 Da

IEP (calculated)

6.149

GRAVY (calculated)

0.065

Length

322 amino acids

Sequence
(BLAST)

001: MNGGGKVVCV TGASGYIASW IVKLLLLRGY TVRATVQNPT DTAETEHLLA LEGAKERLKL FKADLLEDCS FEKAIEGCDA VFHTASPVKF IVTDPQTELI
101: DPAVKGTLNV LNTCKKTSSV KRVIVTSSTA AVLVRQPPLE PNDVVDETFF SDPSVCMERK LWYPLSKTLA ENVAWQFAKD NGMDMVVVNP GFIIGPLLQP
201: TLNFSVEIIV DMVKGKNPFN CRYYSFVDVR DVALAHVKAL ETPSANGRYI ISGPSVTINH IKETMRELFP KLCIDDTNGE GLMDGVNCTI CVDKVKNLGV
301: EFTPLKSSLR DTIISLKEKW LL

Best Arabidopsis Sequence Match ( AT1G09480.1 )
(BLAST)

001: MMHEMAYKVC VEKVKSLGIE FTTPIEETLR DTIVSLMEDY KERSKEIMNG GGKLVCVTGA SGYIASWIVK LLLLRGYTVK ATVRDLTDRK KTEHLLALDG
101: AKERLKLFKA DLLEESSFEQ AIEGCDAVFH TASPVFFTVK DPQTELIDPA LKGTMNVLNT CKETPSVRRV ILTSSTAAVL FRQPPVEASD VVDETFFSDP
201: SLCRETKNWY PLSKILAENA AWEFAKDNGI DMVVLNPGFI FGPLLQPTLN FSVELIVDFI NGKNPFNSRF YRFVDVRDVA LAHIKALETP SANGRYIIDG
301: PIMSVSDIID ILRELLPDLC IADTNEESVM NEMLCKVCVE KVKNLGVEFT PMKSSLRDTI VSLKEKCLL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.