Factsheet for Bra004316.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96012	Canola	cytosol, nucleus, peroxisome	99.07	99.07
Bra008822.1-P	Field mustard	cytosol	84.11	98.18
AT1G68540.1	Thale cress	cytosol	90.34	90.34
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	72.59	72.81
KRH75363	Soybean	cytosol	71.96	72.41
PGSC0003DMT400013318	Potato	cytosol, extracellular, plastid	69.78	70.0
KRH49476	Soybean	cytosol	69.47	69.91
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	69.47	69.69
Bra024747.1-P	Field mustard	extracellular	50.16	68.22
GSMUA_Achr6P09630_001	Banana	cytosol	67.6	67.81
EES02561	Sorghum	cytosol	63.55	62.77
Bra024744.1-P	Field mustard	cytosol	69.78	61.71
TraesCS3B01G036600.1	Wheat	cytosol	62.62	61.09
TraesCS3D01G033300.1	Wheat	cytosol	62.62	61.09
TraesCS3A01G046700.1	Wheat	cytosol	61.99	60.49
Os01t0127500-01	Rice	cytosol	59.81	56.97
HORVU3Hr1G004270.1	Barley	mitochondrion	40.81	54.58
Bra010535.1-P	Field mustard	cytosol	42.68	44.19
Bra030440.1-P	Field mustard	cytosol	41.43	40.92
Bra023231.1-P	Field mustard	cytosol	40.5	40.0
Bra014263.1-P	Field mustard	cytosol	40.5	40.0
Bra002236.1-P	Field mustard	cytosol	41.12	40.0
Bra026090.1-P	Field mustard	cytosol	42.06	39.59
Bra035150.1-P	Field mustard	cytosol	40.81	39.46
Bra020020.1-P	Field mustard	extracellular, golgi	39.56	39.44
Bra026737.1-P	Field mustard	cytosol	42.06	39.36
Bra008438.1-P	Field mustard	cytosol	39.88	38.67
Bra020021.1-P	Field mustard	golgi	38.01	37.89
Bra020019.1-P	Field mustard	extracellular, golgi	38.32	37.73
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	37.38	37.15
Bra031666.1-P	Field mustard	golgi	35.83	36.39
Bra038342.1-P	Field mustard	cytosol, golgi, peroxisome	36.14	35.69
Bra026600.1-P	Field mustard	cytosol	32.71	32.71

Protein Annotations

EnsemblPlants:Bra004316.1	EnsemblPlants:Bra004316.1-P	EnsemblPlantsGene:Bra004316	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF503
PFAM:PF01370	SUPFAM:SSF51735	UniParc:UPI000254174F	UniProt:M4CJD2	MapMan:21.8.1.5	:

Description

AT1G68540 (E=1e-171) | oxidoreductase family protein

Coordinates

chrA07:+:17941066..17942296

Molecular Weight (calculated)

35624.8 Da

IEP (calculated)

6.782

GRAVY (calculated)

-0.148

Length

321 amino acids

Sequence
(BLAST)

001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPQDEEK VGFLWELKGA KERLKMFKAD LTVDGSFNEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMNS CAKSKTTLKR IVLTSSCSSI RYCFDATKAS PLNESHWSDP DYCKRFNLWY AYAKTLGEKE AWRIAEEKGL NLVVVNPSFV VGPLLGPKPT
201: STLLYILAIV KGLAGEYPNL TVGFVHIDDV VAAHVLAMEE PKASGRIVCS SSVAHWSEII VLLRNKYPNY PLESKCSDKE GDNNPHSMDT RKMHELGFAS
301: FKSLPEMFDD CIRSFQEKGL L

Best Arabidopsis Sequence Match ( AT1G68540.1 )
(BLAST)

001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPRDEEK VGFLWEFQGA KQRLKILQAD LTVEGSFDEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L

Arabidopsis Description

TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.