CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49476	Soybean	cytosol	90.6	90.6
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	80.88	80.62
Bra008822.1-P	Field mustard	cytosol	63.64	73.82
AT1G68540.1	Thale cress	cytosol	73.98	73.52
PGSC0003DMT400013318	Potato	cytosol, extracellular, plastid	73.67	73.44
CDX69634	Canola	cytosol	73.67	73.21
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	73.04	72.81
CDY38590	Canola	cytosol	73.04	72.59
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	72.41	71.96
CDX96012	Canola	cytosol, nucleus, peroxisome	72.1	71.65
GSMUA_Achr6P09630_001	Banana	cytosol	71.16	70.94
AT1G25460.1	Thale cress	cytosol, plastid	65.52	65.52
CDX84989	Canola	cytosol	65.52	65.11
CDY42105	Canola	cytosol, plastid	65.52	65.11
EES02561	Sorghum	cytosol	63.95	62.77
TraesCS3B01G036600.1	Wheat	cytosol	64.26	62.31
TraesCS3D01G033300.1	Wheat	cytosol	63.32	61.4
TraesCS3A01G046700.1	Wheat	cytosol	63.32	61.4
Os01t0127500-01	Rice	cytosol	63.01	59.64
Bra024747.1-P	Field mustard	extracellular	43.57	58.9
Bra024744.1-P	Field mustard	cytosol	65.83	57.85
CDX84988	Canola	cytosol	55.17	57.7
CDY42108	Canola	cytosol	42.32	57.45
HORVU3Hr1G004270.1	Barley	mitochondrion	41.38	55.0
KRH47350	Soybean	cytosol	45.45	43.67
KRH44552	Soybean	cytosol	45.14	43.24
KRH24066	Soybean	mitochondrion	45.14	42.48
KRH09917	Soybean	mitochondrion	43.57	41.87
KRH23414	Soybean	mitochondrion	43.26	41.69
KRH09656	Soybean	cytosol	43.89	41.67
KRH24068	Soybean	endoplasmic reticulum	41.69	40.92
KRH24064	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	41.69	40.55
KRH23636	Soybean	cytosol	42.63	40.24
KRG98697	Soybean	nucleus	40.13	39.38
KRG98694	Soybean	endoplasmic reticulum	39.5	38.77
KRH72740	Soybean	cytosol	37.62	37.5
KRG98212	Soybean	endoplasmic reticulum	36.05	35.83
KRH30171	Soybean	nucleus	35.74	35.51
KRH17091	Soybean	cytosol, golgi, plastid	36.99	32.78
KRH11704	Soybean	cytosol	32.6	31.52

Protein Annotations

EMBL:ACUP02000337	EnsemblPlants:KRH75363	EnsemblPlantsGene:GLYMA_01G080700	EntrezGene:100808002	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF503	PFAM:PF01370	ProteinID:KRH75363	ProteinID:KRH75363.1	SUPFAM:SSF51735	UniParc:UPI00019AA97E
UniProt:A0A0R0LDW8	MapMan:21.8.1.5	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:22854910..22870643

Molecular Weight (calculated)

35535.8 Da

IEP (calculated)

6.100

GRAVY (calculated)

-0.100

Length

319 amino acids

Sequence
(BLAST)

001: MPEFCVTGGT GFIASYLVKA LLEKGHTVRT TVRNPGDVEK VGFLTELSGA KERLKILKAD LLVEGSFDEA VRGVDGVFHM ASPVLIPYDE NVQQNLIDPC
101: IKGTLNVLNS CVKATVKHFV LTSSCSSIRY RDDVQEVCPL NESHWTDLEY CKRYKLWYAY AKTIAEREAW RIAKENGMDL VVVNPSFVVG PLLAPQPTST
201: LLLILSIVKG MKGEYPNTTV GFVHINDVVA AHLLAMEDPK ASGRLICSST VAHWSQIIEM LRAKYPSYPY ENECSSQEGD NNPHSMDTTK ITQLGFPPFK
301: TLEQMFDDCI KSFQDKGFL

Best Arabidopsis Sequence Match ( AT1G68540.1 )
(BLAST)

001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPRDEEK VGFLWEFQGA KQRLKILQAD LTVEGSFDEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L

Arabidopsis Description

TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.