CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 3
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24068	Soybean	endoplasmic reticulum	71.68	74.77
KRG98694	Soybean	endoplasmic reticulum	71.09	74.15
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	70.21	73.91
KRG98697	Soybean	nucleus	70.8	73.85
KRH24064	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	69.91	72.26
AT1G51410.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	67.85	70.77
CDY43911	Canola	cytosol	67.55	70.46
Bra030440.1-P	Field mustard	cytosol	67.26	70.15
Solyc01g008550.2.1	Tomato	extracellular, nucleus	66.08	70.0
Bra014263.1-P	Field mustard	cytosol	66.96	69.85
CDY03618	Canola	cytosol	66.96	69.85
CDY65726	Canola	cytosol	66.96	69.85
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	65.78	69.25
Bra023231.1-P	Field mustard	cytosol	66.37	69.23
CDY22576	Canola	cytosol	65.78	68.62
Solyc01g008530.2.1	Tomato	endoplasmic reticulum	66.08	68.29
Solyc01g008540.2.1	Tomato	endoplasmic reticulum	60.18	63.16
KRH72740	Soybean	cytosol	45.43	48.12
KRH47350	Soybean	cytosol	46.02	46.99
KRH44552	Soybean	cytosol	46.02	46.85
KRH09656	Soybean	cytosol	45.72	46.13
KRH75363	Soybean	cytosol	42.48	45.14
KRH23636	Soybean	cytosol	44.25	44.38
KRH49476	Soybean	cytosol	41.0	43.57
KRH17091	Soybean	cytosol, golgi, plastid	44.25	41.67
KRH30171	Soybean	nucleus	39.23	41.43
KRG98212	Soybean	endoplasmic reticulum	38.64	40.81
KRH11704	Soybean	cytosol	38.05	39.09
KRH23414	Soybean	mitochondrion	37.76	38.67
KRH09917	Soybean	mitochondrion	37.76	38.55

Protein Annotations

EMBL:ACUP02007168	EnsemblPlants:KRH24066	EnsemblPlantsGene:GLYMA_12G019800	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0050662	InterPro:Epimerase_deHydtase
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF407	PFAM:PF01370	ProteinID:KRH24066	ProteinID:KRH24066.1
SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI00023CC15F	UniProt:I1LPA3	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr12:-:1386868..1390798

Molecular Weight (calculated)

37782.4 Da

IEP (calculated)

8.106

GRAVY (calculated)

-0.157

Length

339 amino acids

Sequence
(BLAST)

001: MGCKRTPLKR KLKNMSSSAG KLVCVTGAAG YIASWIVKFL LERGYTVRAT VRNPNDHTKV EHLLKLEGAK ERLHLFKADL LGENSFDSIV EGCDGVFHTA
101: SPFIINVKDP QADLLDPAVK GTLNVLKSCV KSPSVKRVIL TSSVAAVAYN KRPKSPEVVV DETWWSDPDY CRELKLWYLL SKTLAEDAAW KFAKENDLDL
201: VVVNPAMVVG PLLQAELNTS AAIILNLING SETFSNDTYG WINVKDVANA HIQAYEIASA SGRYCLVERV AHYSELARIL RDQYPTYQIP EKSADDKPYV
301: PTFQVSKEKA KTLGIEFIPL EVSLRETVET LKEKNFANF

Best Arabidopsis Sequence Match ( AT1G51410.1 )
(BLAST)

001: MSSEEEKTVC VTGASGYIAS WIVKLLLLRG YTVKASVRDP NDPRKTEHLL ALEGAEERLK LFKANLLEEG SFDSAIDGCE GVFHTASPFY HDVKDPQAEL
101: LDPAVKGTIN VLSSCLKTSS VKRVVLTSSI AAVAFNGMPR TPETIVDETW FADPDYCRAS KLWYVLSKTL AENAAWKFAK ENNLQLVSIN PAMVIGPLLQ
201: PTLNTSAAAV LSLIKGAQTF PNATFGWVNV KDVANAHIQA FENPDADGRY CLVERVAHYS EVVNILHDLY PDFQLPEKCA DEKIYIPTYK VSKEKAESLG
301: VEFVPLEVSI KETVESLRDK GFIRF

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q4PSZ5]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.