CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98697	Soybean	nucleus	94.46	94.46
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	75.08	75.78
Solyc01g008550.2.1	Tomato	extracellular, nucleus	73.23	74.38
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	73.23	73.91
AT1G51410.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	72.62	72.62
Solyc01g008530.2.1	Tomato	endoplasmic reticulum	73.23	72.56
Bra014263.1-P	Field mustard	cytosol	72.31	72.31
CDY43911	Canola	cytosol	72.31	72.31
CDY03618	Canola	cytosol	72.31	72.31
CDY65726	Canola	cytosol	72.31	72.31
Bra030440.1-P	Field mustard	cytosol	72.0	72.0
Bra023231.1-P	Field mustard	cytosol	71.69	71.69
KRH24066	Soybean	mitochondrion	74.15	71.09
CDY22576	Canola	cytosol	70.77	70.77
KRH24064	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	71.38	70.73
KRH24068	Soybean	endoplasmic reticulum	68.92	68.92
Solyc01g008540.2.1	Tomato	endoplasmic reticulum	66.15	66.56
KRH72740	Soybean	cytosol	44.92	45.62
KRH47350	Soybean	cytosol	44.31	43.37
KRH09656	Soybean	cytosol	44.62	43.15
KRH44552	Soybean	cytosol	44.0	42.94
KRH23636	Soybean	cytosol	43.69	42.01
KRH30171	Soybean	nucleus	41.23	41.74
KRG98212	Soybean	endoplasmic reticulum	40.62	41.12
KRH09917	Soybean	mitochondrion	40.92	40.06
KRH23414	Soybean	mitochondrion	40.62	39.88
KRH17091	Soybean	cytosol, golgi, plastid	44.0	39.72
KRH49476	Soybean	cytosol	38.77	39.5
KRH75363	Soybean	cytosol	38.77	39.5
KRH11704	Soybean	cytosol	37.54	36.97

Protein Annotations

EMBL:ACUP02010912	EnsemblPlants:KRG98694	EnsemblPlantsGene:GLYMA_18G091300	EntrezGene:100816745	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF407	PFAM:PF01370	ProteinID:KRG98694	ProteinID:KRG98694.1	SUPFAM:SSF51735	UniParc:UPI000233DFBE
UniProt:I1N0K1	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:9117664..9125559

Molecular Weight (calculated)

35750.9 Da

IEP (calculated)

6.864

GRAVY (calculated)

-0.065

Length

325 amino acids

Sequence
(BLAST)

001: MSSGAGKVVC VTGASGYIAS WIVKFLLLRG YTVKATVRDT SDPKKTNHLI GLDGAKERLH LYEANLLEEG SFNSVVQGCH AVFHTASPFY HNVKDPQAEL
101: LDPALKGTLN VLKSCVNLPT LERVVLTSSV AAVANNGKPL TPYVVVDETW FSDPDLCREA KRWYTLSKTL AEDAAWKFVK ENNIDMVTIN PAMVIGPLLQ
201: PVLNTSAASI LNIINGAETF PNASYGWVNV KDVANAHILA YENASANGRY CLVERVAHYS EIVKVLPDLY PTLQLPEKCA DDKPYVPIYQ VSKEKAKSLG
301: IEYTPLEVSL KETVDSLKEK KFTNF

Best Arabidopsis Sequence Match ( AT1G51410.1 )
(BLAST)

001: MSSEEEKTVC VTGASGYIAS WIVKLLLLRG YTVKASVRDP NDPRKTEHLL ALEGAEERLK LFKANLLEEG SFDSAIDGCE GVFHTASPFY HDVKDPQAEL
101: LDPAVKGTIN VLSSCLKTSS VKRVVLTSSI AAVAFNGMPR TPETIVDETW FADPDYCRAS KLWYVLSKTL AENAAWKFAK ENNLQLVSIN PAMVIGPLLQ
201: PTLNTSAAAV LSLIKGAQTF PNATFGWVNV KDVANAHIQA FENPDADGRY CLVERVAHYS EVVNILHDLY PDFQLPEKCA DEKIYIPTYK VSKEKAESLG
301: VEFVPLEVSI KETVESLRDK GFIRF

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q4PSZ5]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.