Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023231.1-P | Field mustard | cytosol | 98.77 | 98.77 |
| CDY65726 | Canola | cytosol | 97.85 | 97.85 |
| CDY03618 | Canola | cytosol | 97.85 | 97.85 |
| CDY43911 | Canola | cytosol | 96.62 | 96.62 |
| AT1G51410.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 94.46 | 94.46 |
| VIT_06s0004g02380.t01 | Wine grape | endoplasmic reticulum, golgi, plastid | 74.77 | 75.47 |
| CDY14000 | Canola | cytosol | 74.46 | 74.23 |
| CDX92530 | Canola | cytosol | 74.46 | 73.33 |
| VIT_06s0004g02370.t01 | Wine grape | endoplasmic reticulum, golgi | 72.0 | 72.67 |
| KRG98697 | Soybean | nucleus | 71.08 | 71.08 |
| KRG98694 | Soybean | endoplasmic reticulum | 70.77 | 70.77 |
| Solyc01g008530.2.1 | Tomato | endoplasmic reticulum | 71.08 | 70.43 |
| Solyc01g008550.2.1 | Tomato | extracellular, nucleus | 67.38 | 68.44 |
| Solyc01g008540.2.1 | Tomato | endoplasmic reticulum | 66.46 | 66.87 |
| KRH24066 | Soybean | mitochondrion | 68.62 | 65.78 |
| KRH24068 | Soybean | endoplasmic reticulum | 64.0 | 64.0 |
| KRH24064 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 64.0 | 63.41 |
| CDY72415 | Canola | cytosol, endoplasmic reticulum, peroxisome | 56.92 | 56.92 |
| CDY68009 | Canola | cytosol, endoplasmic reticulum, golgi | 56.0 | 56.52 |
| CDY64747 | Canola | extracellular, golgi, mitochondrion, plastid | 55.08 | 55.25 |
| CDY45844 | Canola | cytosol, golgi, peroxisome | 55.08 | 55.08 |
| CDX94965 | Canola | golgi | 54.77 | 54.77 |
| CDX94966 | Canola | golgi, mitochondrion, peroxisome, plastid | 54.15 | 54.66 |
| CDX94967 | Canola | plasma membrane | 52.31 | 52.8 |
| CDX94968 | Canola | endoplasmic reticulum, golgi, plastid | 52.0 | 51.84 |
| CDY35052 | Canola | cytosol | 44.0 | 51.81 |
| CDY32979 | Canola | cytosol, endoplasmic reticulum, peroxisome | 47.38 | 47.68 |
| CDY64748 | Canola | cytosol | 54.46 | 47.33 |
| CDY63972 | Canola | cytosol | 48.0 | 47.13 |
| CDX81743 | Canola | cytosol | 49.23 | 47.06 |
| CDY57397 | Canola | cytosol, endoplasmic reticulum, peroxisome | 46.77 | 47.06 |
| CDY33365 | Canola | cytosol | 49.54 | 46.94 |
| CDY52857 | Canola | cytosol | 49.23 | 46.65 |
| CDY64860 | Canola | cytosol | 47.38 | 46.53 |
| CDY39941 | Canola | cytosol | 46.77 | 45.78 |
| CDX87345 | Canola | cytosol | 46.77 | 45.78 |
| CDY24810 | Canola | cytosol | 44.31 | 45.43 |
| CDX69139 | Canola | cytosol, extracellular, plastid | 44.31 | 45.14 |
| CDX75502 | Canola | cytosol, extracellular, plastid | 44.31 | 45.14 |
| CDY41656 | Canola | cytosol, plastid, vacuole | 43.38 | 44.48 |
| CDY09372 | Canola | cytosol | 41.54 | 42.06 |
| CDX69634 | Canola | cytosol | 40.62 | 41.12 |
| CDY15830 | Canola | cytosol | 40.62 | 41.12 |
| CDY38590 | Canola | cytosol | 40.31 | 40.81 |
| CDX96012 | Canola | cytosol, nucleus, peroxisome | 40.0 | 40.5 |
| CDY42105 | Canola | cytosol, plastid | 38.15 | 38.63 |
| CDX84989 | Canola | cytosol | 37.85 | 38.32 |
| CDX84988 | Canola | cytosol | 33.23 | 35.41 |
| CDY42108 | Canola | cytosol | 24.0 | 33.19 |
Protein Annotations
| EnsemblPlants:CDY22576 | EnsemblPlantsGene:GSBRNA2T00019191001 | Gene3D:3.40.50.720 | GO:A0A078GB49 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF407 |
| PFAM:PF01370 | ProteinID:CDY22576 | ProteinID:CDY22576.1 | SUPFAM:SSF51735 | UniParc:UPI0004EE3146 | UniProt:A0A078GB49 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC05g24140DBnaC05g24140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GB49]
Coordinates
chrLK032133:-:212337..214203
Molecular Weight (calculated)
35878.9 Da
IEP (calculated)
5.240
GRAVY (calculated)
-0.030
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSEEEKTVC VTGASGYIAS WIVKLLLLRG YTVKASVRDP NDPRKTEHLL ALEGAAERLQ LFKANLLEEG SFDSAIDGCQ GVFHTASPFY HDVKDPQAEL
101: LDPAVKGTIN VLSTCLKTPS VKRVVLTSSI AAVAFNGMPR TPDTIVDESW FADPEYCRAA KLWYVLSKTL AENAAWKFAK ENDMQLVSIN AAMVIGPLLQ
201: PTLNTSAAAV LSLIKGAQTF PNATFGWVNV KDVANAHIQA FENPDANGRY CLVERVAHYS EVVNILHDLY PDFQLPQKCS DEKIFIPTYK VSKEKAEFLG
301: VEFVPLEVSI KETVESLQDK GFIRF
101: LDPAVKGTIN VLSTCLKTPS VKRVVLTSSI AAVAFNGMPR TPDTIVDESW FADPEYCRAA KLWYVLSKTL AENAAWKFAK ENDMQLVSIN AAMVIGPLLQ
201: PTLNTSAAAV LSLIKGAQTF PNATFGWVNV KDVANAHIQA FENPDANGRY CLVERVAHYS EVVNILHDLY PDFQLPQKCS DEKIFIPTYK VSKEKAEFLG
301: VEFVPLEVSI KETVESLQDK GFIRF
001: MSSEEEKTVC VTGASGYIAS WIVKLLLLRG YTVKASVRDP NDPRKTEHLL ALEGAEERLK LFKANLLEEG SFDSAIDGCE GVFHTASPFY HDVKDPQAEL
101: LDPAVKGTIN VLSSCLKTSS VKRVVLTSSI AAVAFNGMPR TPETIVDETW FADPDYCRAS KLWYVLSKTL AENAAWKFAK ENNLQLVSIN PAMVIGPLLQ
201: PTLNTSAAAV LSLIKGAQTF PNATFGWVNV KDVANAHIQA FENPDADGRY CLVERVAHYS EVVNILHDLY PDFQLPEKCA DEKIYIPTYK VSKEKAESLG
301: VEFVPLEVSI KETVESLRDK GFIRF
101: LDPAVKGTIN VLSSCLKTSS VKRVVLTSSI AAVAFNGMPR TPETIVDETW FADPDYCRAS KLWYVLSKTL AENAAWKFAK ENNLQLVSIN PAMVIGPLLQ
201: PTLNTSAAAV LSLIKGAQTF PNATFGWVNV KDVANAHIQA FENPDADGRY CLVERVAHYS EVVNILHDLY PDFQLPEKCA DEKIYIPTYK VSKEKAESLG
301: VEFVPLEVSI KETVESLRDK GFIRF
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q4PSZ5]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.