CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	99.07	99.07
CDX69634	Canola	cytosol	96.88	96.88
CDY38590	Canola	cytosol	96.26	96.26
AT1G68540.1	Thale cress	cytosol	90.03	90.03
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	72.27	72.5
KRH75363	Soybean	cytosol	71.65	72.1
PGSC0003DMT400013318	Potato	cytosol, extracellular, plastid	70.09	70.31
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	69.78	70.0
CDY42105	Canola	cytosol, plastid	69.78	69.78
KRH49476	Soybean	cytosol	69.16	69.59
CDX84989	Canola	cytosol	69.16	69.16
GSMUA_Achr6P09630_001	Banana	cytosol	67.29	67.5
CDY42108	Canola	cytosol	48.91	66.81
CDX84988	Canola	cytosol	63.24	66.56
EES02561	Sorghum	cytosol	62.62	61.85
TraesCS3B01G036600.1	Wheat	cytosol	62.31	60.79
TraesCS3D01G033300.1	Wheat	cytosol	62.31	60.79
TraesCS3A01G046700.1	Wheat	cytosol	61.68	60.18
Os01t0127500-01	Rice	cytosol	59.19	56.38
HORVU3Hr1G004270.1	Barley	mitochondrion	40.5	54.17
CDX75502	Canola	cytosol, extracellular, plastid	46.11	46.4
CDY41656	Canola	cytosol, plastid, vacuole	45.48	46.06
CDX69139	Canola	cytosol, extracellular, plastid	45.48	45.77
CDY24810	Canola	cytosol	45.17	45.74
CDY35052	Canola	cytosol	37.07	43.12
CDY14000	Canola	cytosol	41.43	40.8
CDY43911	Canola	cytosol	40.81	40.31
CDY22576	Canola	cytosol	40.5	40.0
CDX92530	Canola	cytosol	40.81	39.7
CDY03618	Canola	cytosol	40.19	39.69
CDY65726	Canola	cytosol	40.19	39.69
CDX81743	Canola	cytosol	41.43	39.12
CDY52857	Canola	cytosol	41.74	39.07
CDY39941	Canola	cytosol	40.19	38.86
CDX87345	Canola	cytosol	40.19	38.86
CDX94967	Canola	plasma membrane	38.94	38.82
CDY33365	Canola	cytosol	41.43	38.78
CDY63972	Canola	cytosol	39.88	38.67
CDX94965	Canola	golgi	38.94	38.46
CDY64860	Canola	cytosol	39.25	38.07
CDX94968	Canola	endoplasmic reticulum, golgi, plastid	38.63	38.04
CDY64747	Canola	extracellular, golgi, mitochondrion, plastid	38.32	37.96
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	37.69	37.46
CDX94966	Canola	golgi, mitochondrion, peroxisome, plastid	37.38	37.27
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	37.07	36.84
CDY72415	Canola	cytosol, endoplasmic reticulum, peroxisome	36.45	36.0
CDY68009	Canola	cytosol, endoplasmic reticulum, golgi	35.83	35.71
CDY45844	Canola	cytosol, golgi, peroxisome	35.83	35.38
CDY64748	Canola	cytosol	38.32	32.89
CDY15830	Canola	cytosol	32.71	32.71
CDY09372	Canola	cytosol	32.09	32.09

Protein Annotations

EnsemblPlants:CDX96012	EnsemblPlantsGene:GSBRNA2T00102043001	Gene3D:3.40.50.720	GO:A0A078E4J9	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF503
PFAM:PF01370	ProteinID:CDX96012	ProteinID:CDX96012.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EE2DA3
MapMan:21.8.1.5	:	:	:	:	:

Description

BnaA07g27190D

Coordinates

chrLK031892:-:618078..619414

Molecular Weight (calculated)

35681.8 Da

IEP (calculated)

6.996

GRAVY (calculated)

-0.168

Length

321 amino acids

Sequence
(BLAST)

001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPQDEEK VGFLWELKGA KERLKMFKAD LTVDGSFNEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMNS CAKSKTTLKR IVLTSSCSSI RYRFDATKAS PLNESHWSDP DYCKRFNLWY AYAKTLGEKE AWRIAEEKGL NLVVVNSSFV VGPLLGPKPT
201: STLLYILAIV KGLAGEYPNL TVGFVHIDDV VAAHVLAMEE PKASGRIVCS SSVAHWSEII VLLRNKYPNY PLESKCSDKE GENNPHSMDT RKMHELGFAS
301: FKSLPEMFDD CIRSFQEKGL L

Best Arabidopsis Sequence Match ( AT1G68540.1 )
(BLAST)

001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPRDEEK VGFLWEFQGA KQRLKILQAD LTVEGSFDEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L

Arabidopsis Description

TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.