Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52857 | Canola | cytosol | 97.94 | 97.08 |
| Bra026737.1-P | Field mustard | cytosol | 97.65 | 96.79 |
| CDY33365 | Canola | cytosol | 97.35 | 96.5 |
| CDY35052 | Canola | cytosol | 77.94 | 96.01 |
| AT1G15950.1 | Thale cress | cytosol | 94.41 | 93.31 |
| CDY63972 | Canola | cytosol | 81.18 | 83.38 |
| CDY64860 | Canola | cytosol | 80.88 | 83.08 |
| CDX87345 | Canola | cytosol | 80.88 | 82.83 |
| CDY39941 | Canola | cytosol | 80.0 | 81.93 |
| PGSC0003DMT400051049 | Potato | endoplasmic reticulum, peroxisome, plastid | 77.65 | 79.52 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 78.53 | 78.99 |
| PGSC0003DMT400073398 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 76.47 | 78.31 |
| Solyc06g068440.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 75.88 | 77.71 |
| Solyc03g116910.2.1 | Tomato | endoplasmic reticulum, peroxisome, plastid | 75.59 | 77.41 |
| KRH09656 | Soybean | cytosol | 75.59 | 76.49 |
| KRH47350 | Soybean | cytosol | 73.53 | 75.3 |
| KRH44552 | Soybean | cytosol | 73.53 | 75.08 |
| KRH23636 | Soybean | cytosol | 73.82 | 74.26 |
| GSMUA_Achr5P04460_001 | Banana | cytosol, peroxisome, plastid | 70.0 | 70.83 |
| TraesCS5A01G225100.3 | Wheat | cytosol, plastid | 71.76 | 70.11 |
| GSMUA_Achr11P... | Banana | plastid | 68.53 | 69.97 |
| GSMUA_Achr11P... | Banana | cytosol | 68.24 | 69.25 |
| TraesCS7D01G150500.1 | Wheat | cytosol | 69.41 | 69.21 |
| TraesCS7A01G149000.1 | Wheat | cytosol | 70.0 | 68.99 |
| TraesCS5D01G232400.1 | Wheat | cytosol, peroxisome, plastid | 71.18 | 68.95 |
| HORVU7Hr1G030380.2 | Barley | cytosol | 69.12 | 68.92 |
| TraesCS5B01G223700.2 | Wheat | cytosol | 72.06 | 68.63 |
| TraesCS7D01G150600.1 | Wheat | cytosol | 68.82 | 68.22 |
| HORVU7Hr1G022220.4 | Barley | cytosol | 67.06 | 67.06 |
| EER89338 | Sorghum | cytosol | 68.24 | 67.05 |
| Os09t0419200-01 | Rice | cytosol | 70.29 | 66.95 |
| Os08t0441500-01 | Rice | cytosol, peroxisome, plastid | 70.59 | 66.48 |
| Zm00001d045101_P001 | Maize | cytosol | 66.18 | 66.18 |
| EES15061 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 72.65 | 66.04 |
| Zm00001d019669_P001 | Maize | cytosol | 65.0 | 64.81 |
| OQU89100 | Sorghum | cytosol | 65.59 | 64.45 |
| HORVU0Hr1G013070.1 | Barley | cytosol | 64.71 | 64.14 |
| HORVU5Hr1G065330.5 | Barley | cytosol, peroxisome, plastid | 71.18 | 64.02 |
| TraesCS7B01G052700.1 | Wheat | plastid | 68.24 | 62.87 |
| Os09t0127300-01 | Rice | cytosol | 63.53 | 62.25 |
| Zm00001d050417_P001 | Maize | cytosol | 65.88 | 61.71 |
| TraesCS5D01G073300.1 | Wheat | cytosol | 60.0 | 60.71 |
| TraesCS7B01G052600.1 | Wheat | cytosol | 70.0 | 60.56 |
| TraesCS5B01G069600.1 | Wheat | cytosol, mitochondrion, peroxisome | 59.71 | 60.42 |
| HORVU5Hr1G050940.1 | Barley | cytosol | 63.53 | 60.34 |
| TraesCS5A01G163400.1 | Wheat | cytosol | 63.24 | 60.22 |
| TraesCS5D01G168400.1 | Wheat | cytosol | 63.24 | 60.22 |
| TraesCS5A01G061600.1 | Wheat | cytosol, mitochondrion, peroxisome | 59.41 | 60.12 |
| Zm00001d032152_P001 | Maize | cytosol | 71.18 | 59.31 |
| TraesCS5B01G069500.1 | Wheat | cytosol | 59.12 | 59.29 |
| TraesCS5D01G073400.1 | Wheat | cytosol | 59.12 | 59.29 |
| TraesCS5B01G160700.1 | Wheat | cytosol | 63.53 | 59.18 |
| Os08t0277200-01 | Rice | plastid | 58.82 | 58.48 |
| TraesCS5A01G061700.1 | Wheat | cytosol | 58.24 | 58.41 |
| EES04640 | Sorghum | golgi, plastid | 56.18 | 55.69 |
| TraesCS6D01G136600.2 | Wheat | extracellular, vacuole | 56.18 | 55.52 |
| Zm00001d015513_P001 | Maize | golgi, peroxisome, plastid, vacuole | 55.88 | 54.91 |
| Os02t0180700-01 | Rice | extracellular | 55.29 | 54.65 |
| HORVU6Hr1G028980.18 | Barley | endoplasmic reticulum, extracellular | 55.0 | 54.2 |
| HORVU5Hr1G016690.3 | Barley | cytosol | 56.76 | 53.46 |
| HORVU5Hr1G016620.2 | Barley | cytosol | 56.47 | 53.33 |
| CDY14000 | Canola | cytosol | 48.24 | 50.31 |
| TraesCS5A01G061800.1 | Wheat | cytosol | 41.18 | 50.18 |
| TraesCS6B01G175600.2 | Wheat | plastid | 56.47 | 50.13 |
| CDX92530 | Canola | cytosol | 48.24 | 49.7 |
| CDY22576 | Canola | cytosol | 47.06 | 49.23 |
| CDY43911 | Canola | cytosol | 46.76 | 48.92 |
| CDY03618 | Canola | cytosol | 46.47 | 48.62 |
| CDY65726 | Canola | cytosol | 46.47 | 48.62 |
| CDY68009 | Canola | cytosol, endoplasmic reticulum, golgi | 44.71 | 47.2 |
| CDY64747 | Canola | extracellular, golgi, mitochondrion, plastid | 44.71 | 46.91 |
| CDX94965 | Canola | golgi | 44.12 | 46.15 |
| CDY72415 | Canola | cytosol, endoplasmic reticulum, peroxisome | 44.12 | 46.15 |
| CDY57397 | Canola | cytosol, endoplasmic reticulum, peroxisome | 43.82 | 46.13 |
| CDY32979 | Canola | cytosol, endoplasmic reticulum, peroxisome | 43.53 | 45.82 |
| CDX94966 | Canola | golgi, mitochondrion, peroxisome, plastid | 43.24 | 45.65 |
| CDX94967 | Canola | plasma membrane | 42.94 | 45.34 |
| CDY45844 | Canola | cytosol, golgi, peroxisome | 43.24 | 45.23 |
| CDX94968 | Canola | endoplasmic reticulum, golgi, plastid | 43.24 | 45.09 |
| TraesCS6A01G147300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 56.18 | 44.84 |
| CDX69139 | Canola | cytosol, extracellular, plastid | 40.0 | 42.63 |
| CDX75502 | Canola | cytosol, extracellular, plastid | 40.0 | 42.63 |
| CDY38590 | Canola | cytosol | 40.0 | 42.37 |
| CDX69634 | Canola | cytosol | 40.0 | 42.37 |
| CDY24810 | Canola | cytosol | 39.12 | 41.96 |
| CDY41656 | Canola | cytosol, plastid, vacuole | 38.82 | 41.64 |
| CDX96012 | Canola | cytosol, nucleus, peroxisome | 39.12 | 41.43 |
| CDY09372 | Canola | cytosol | 38.53 | 40.81 |
| CDY15830 | Canola | cytosol | 37.94 | 40.19 |
| CDY64748 | Canola | cytosol | 44.12 | 40.11 |
| CDY42105 | Canola | cytosol, plastid | 36.47 | 38.63 |
| CDX84989 | Canola | cytosol | 36.18 | 38.32 |
| CDX84988 | Canola | cytosol | 32.06 | 35.74 |
| CDY42108 | Canola | cytosol | 22.06 | 31.91 |
| HORVU5Hr1G016670.3 | Barley | plastid | 1.76 | 14.29 |
Protein Annotations
| EnsemblPlants:CDX81743 | EnsemblPlantsGene:GSBRNA2T00136674001 | Gene3D:3.40.50.720 | GO:A0A078D351 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF404 |
| PFAM:PF01370 | ProteinID:CDX81743 | ProteinID:CDX81743.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EE352B |
| MapMan:21.6.1.5 | : | : | : | : | : |
Description
BnaC08g38580D
Coordinates
chrLK031826:+:591358..594300
Molecular Weight (calculated)
37224.4 Da
IEP (calculated)
5.479
GRAVY (calculated)
-0.254
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVDESTAVG KTVCVTGAGG YIASWIVKLL LERGYTVKGT VRNPDDPKNT HLRELEGAKE RLILCKADLQ DYDALKSAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPSRDPE AVVDESCWSD LEFCKNTKNW YCYGKMVAEQ AAWETAEEKG VDLVVLNPVL VLGPPLQPTI
201: NASLFHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESALHRGEV VEILAKLFPE YPIPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLPPPSTSQE SSQNGIKIES
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPSRDPE AVVDESCWSD LEFCKNTKNW YCYGKMVAEQ AAWETAEEKG VDLVVLNPVL VLGPPLQPTI
201: NASLFHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESALHRGEV VEILAKLFPE YPIPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLPPPSTSQE SSQNGIKIES
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.