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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, peroxisome

Predictor Summary:
  • cytosol 1
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:golgi
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400051049 Potato endoplasmic reticulum, peroxisome, plastid 97.29 97.29
Solyc06g068440.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plastid 87.95 87.95
VIT_09s0070g00240.t01 Wine grape cytosol 81.63 80.18
KRH44552 Soybean cytosol 78.92 78.68
KRH47350 Soybean cytosol 78.31 78.31
KRH09656 Soybean cytosol 78.01 77.08
CDY35052 Canola cytosol 63.86 76.81
CDX81743 Canola cytosol 77.41 75.59
KRH23636 Soybean cytosol 76.81 75.44
Bra026090.1-P Field mustard cytosol 77.11 75.07
CDY33365 Canola cytosol 77.11 74.64
CDY52857 Canola cytosol 76.81 74.34
Bra026737.1-P Field mustard cytosol 76.81 74.34
AT1G15950.1 Thale cress cytosol 76.81 74.13
CDY63972 Canola cytosol 73.8 74.02
CDY64860 Canola cytosol 73.8 74.02
Bra008438.1-P Field mustard cytosol 73.8 74.02
AT1G80820.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 73.49 73.49
Bra035150.1-P Field mustard cytosol 73.49 73.49
CDX87345 Canola cytosol 73.49 73.49
CDY39941 Canola cytosol 72.89 72.89
GSMUA_Achr5P04460_001 Banana cytosol, peroxisome, plastid 72.59 71.73
GSMUA_Achr11P... Banana plastid 69.58 69.37
OQU89100 Sorghum cytosol 71.08 68.21
GSMUA_Achr11P... Banana cytosol 68.67 68.06
TraesCS7D01G150500.1 Wheat cytosol 69.88 68.04
Zm00001d019669_P001 Maize cytosol 69.58 67.74
HORVU7Hr1G030380.2 Barley cytosol 69.28 67.45
TraesCS7A01G149000.1 Wheat cytosol 69.58 66.96
TraesCS5A01G225100.3 Wheat cytosol, plastid 70.18 66.95
TraesCS7D01G150600.1 Wheat cytosol 68.67 66.47
TraesCS5D01G232400.1 Wheat cytosol, peroxisome, plastid 70.18 66.38
TraesCS5B01G223700.2 Wheat cytosol 71.08 66.11
HORVU7Hr1G022220.4 Barley cytosol 67.47 65.88
Os09t0419200-01 Rice cytosol 70.78 65.83
Os08t0441500-01 Rice cytosol, peroxisome, plastid 71.39 65.65
Os09t0127300-01 Rice cytosol 68.07 65.13
EER89338 Sorghum cytosol 67.77 65.03
EES15061 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 71.99 63.9
Zm00001d045101_P001 Maize cytosol 65.36 63.82
HORVU5Hr1G050940.1 Barley cytosol 68.67 63.69
HORVU0Hr1G013070.1 Barley cytosol 65.66 63.56
TraesCS5D01G168400.1 Wheat cytosol 68.07 63.31
TraesCS5A01G163400.1 Wheat cytosol 68.07 63.31
TraesCS5D01G073300.1 Wheat cytosol 63.86 63.1
HORVU5Hr1G065330.5 Barley cytosol, peroxisome, plastid 71.39 62.7
TraesCS5B01G160700.1 Wheat cytosol 68.67 62.47
TraesCS7B01G052700.1 Wheat plastid 69.28 62.33
TraesCS5B01G069600.1 Wheat cytosol, mitochondrion, peroxisome 62.65 61.9
TraesCS5A01G061600.1 Wheat cytosol, mitochondrion, peroxisome 62.35 61.61
TraesCS5B01G069500.1 Wheat cytosol 62.35 61.06
TraesCS5D01G073400.1 Wheat cytosol 62.05 60.77
Zm00001d050417_P001 Maize cytosol 65.96 60.33
Os08t0277200-01 Rice plastid 62.05 60.23
TraesCS5A01G061700.1 Wheat cytosol 61.14 59.88
TraesCS7B01G052600.1 Wheat cytosol 70.18 59.29
TraesCS6D01G136600.2 Wheat extracellular, vacuole 60.24 58.14
EES04640 Sorghum golgi, plastid 59.94 58.02
Os02t0180700-01 Rice extracellular 59.64 57.56
Zm00001d032152_P001 Maize cytosol 70.18 57.11
HORVU6Hr1G028980.18 Barley endoplasmic reticulum, extracellular 59.34 57.1
Zm00001d015513_P001 Maize golgi, peroxisome, plastid, vacuole 58.73 56.36
HORVU5Hr1G016690.3 Barley cytosol 59.34 54.57
HORVU5Hr1G016620.2 Barley cytosol 59.04 54.44
TraesCS6B01G175600.2 Wheat plastid 59.94 51.96
TraesCS5A01G061800.1 Wheat cytosol 43.37 51.61
Solyc01g008540.2.1 Tomato endoplasmic reticulum 48.49 49.85
Solyc01g008550.2.1 Tomato extracellular, nucleus 47.89 49.69
Solyc01g008530.2.1 Tomato endoplasmic reticulum 46.69 47.26
TraesCS6A01G147300.1 Wheat cytosol, endoplasmic reticulum, peroxisome 59.94 46.71
Solyc11g072510.1.1 Tomato cytosol, extracellular 45.18 46.3
Solyc01g087640.2.1 Tomato cytosol 44.88 45.43
Solyc01g068080.2.1 Tomato cytosol, extracellular, plastid 42.17 43.75
Solyc01g102730.2.1 Tomato cytosol, peroxisome, plastid 42.17 42.94
Solyc04g008780.2.1 Tomato cytosol 43.07 42.31
HORVU5Hr1G016670.3 Barley plastid 1.2 9.52
Protein Annotations
EMBL:DQ019126EnsemblPlants:Solyc03g116910.2.1EnsemblPlantsGene:Solyc03g116910.2Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016621GO:GO:0050662
GO:GO:0055114InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF552PFAM:PF01370
SUPFAM:SSF51735UniParc:UPI0000519730UniProt:Q4U1I4MapMan:21.6.1.5::
Description
Cinnamoyl-CoA reductase [Source:UniProtKB/TrEMBL;Acc:Q4U1I4]
Coordinates
chr3:-:66177317..66180108
Molecular Weight (calculated)
36823.3 Da
IEP (calculated)
7.467
GRAVY (calculated)
-0.210
Length
332 amino acids
Sequence
(BLAST)
001: MPSESGKVVC VTGAGGFIAS WLVKLLLEKG YTVRGTVRNP DDSKNGHLKE LEGAKERLIL LRADLLDYQS LREAIYGCDG VFHTASPVTD DPEQMVEPAV
101: IGTKNVITAA AETKVRRVVF TSSIGTVYMD PNRAPDKVVD ETCWSDLDYC KNTKNWYCYG KTVAEKTARD EAREKGVDLV VINPVLVLGP LLQPTVNASV
201: LHILKYLTGS AKTYANSIQA YVHVKDVALA HILLYEAPSA SGRYICAERV LHRGDVVEIL AKFFPEYPIP TKCSDETRPR AKPYIFTNQK LKDLGLEFTP
301: VKQCLYETVK SLQEKGHLPV PTQNDEPIKI HS
Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.