Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15061 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 86.78 | 84.22 |
| Os08t0441500-01 | Rice | cytosol, peroxisome, plastid | 79.61 | 80.06 |
| GSMUA_Achr5P04460_001 | Banana | cytosol, peroxisome, plastid | 70.25 | 75.89 |
| Zm00001d032152_P001 | Maize | cytosol | 83.75 | 74.51 |
| GSMUA_Achr11P... | Banana | cytosol | 66.67 | 72.24 |
| CDY35052 | Canola | cytosol | 53.44 | 70.29 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 62.53 | 67.16 |
| Zm00001d045101_P001 | Maize | cytosol | 62.81 | 67.06 |
| PGSC0003DMT400073398 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 60.88 | 66.57 |
| Solyc03g116910.2.1 | Tomato | endoplasmic reticulum, peroxisome, plastid | 60.33 | 65.96 |
| PGSC0003DMT400051049 | Potato | endoplasmic reticulum, peroxisome, plastid | 60.33 | 65.96 |
| Solyc06g068440.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 60.33 | 65.96 |
| CDX81743 | Canola | cytosol | 61.71 | 65.88 |
| Bra026090.1-P | Field mustard | cytosol | 61.16 | 65.1 |
| CDY52857 | Canola | cytosol | 61.43 | 65.01 |
| KRH47350 | Soybean | cytosol | 59.23 | 64.76 |
| CDY33365 | Canola | cytosol | 61.16 | 64.72 |
| Bra026737.1-P | Field mustard | cytosol | 61.16 | 64.72 |
| KRH09656 | Soybean | cytosol | 59.78 | 64.58 |
| KRH44552 | Soybean | cytosol | 58.95 | 64.26 |
| AT1G15950.1 | Thale cress | cytosol | 60.61 | 63.95 |
| KRH23636 | Soybean | cytosol | 58.68 | 63.02 |
| Zm00001d019669_P001 | Maize | cytosol | 58.13 | 61.88 |
| CDY39941 | Canola | cytosol | 55.92 | 61.14 |
| CDX87345 | Canola | cytosol | 55.92 | 61.14 |
| Bra035150.1-P | Field mustard | cytosol | 55.92 | 61.14 |
| CDY63972 | Canola | cytosol | 55.65 | 61.03 |
| CDY64860 | Canola | cytosol | 55.37 | 60.73 |
| Bra008438.1-P | Field mustard | cytosol | 55.37 | 60.73 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 54.82 | 59.94 |
| Zm00001d008332_P001 | Maize | cytosol | 46.01 | 51.07 |
| Zm00001d015513_P001 | Maize | golgi, peroxisome, plastid, vacuole | 47.93 | 50.29 |
| Zm00001d008331_P001 | Maize | cytosol | 43.25 | 48.01 |
| Zm00001d051938_P002 | Maize | cytosol | 48.76 | 47.84 |
| Zm00001d012980_P001 | Maize | cytosol | 38.02 | 41.69 |
| Zm00001d020970_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 35.26 | 38.67 |
| Zm00001d012982_P001 | Maize | cytosol | 38.84 | 37.8 |
| Zm00001d043013_P001 | Maize | cytosol | 24.79 | 35.86 |
| Zm00001d015956_P002 | Maize | plastid | 37.74 | 35.77 |
| Zm00001d031488_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 28.37 | 30.03 |
| Zm00001d012981_P002 | Maize | cytosol | 30.03 | 24.61 |
Protein Annotations
| EnsemblPlants:Zm00001d050417_P001 | EnsemblPlants:Zm00001d050417_T001 | EnsemblPlantsGene:Zm00001d050417 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF404 |
| PFAM:PF01370 | ProteinID:AQK52502.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000842E2F8 | UniProt:A0A1D6Q1L1 |
| MapMan:21.6.1.5 | : | : | : | : | : |
Description
Cinnamoyl-CoA reductase 1
Coordinates
chr4:+:86983204..86986239
Molecular Weight (calculated)
38792.4 Da
IEP (calculated)
7.114
GRAVY (calculated)
-0.005
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVVVDAVVP TDAAGAPAAA AAAPAVRPGN GQTVCVTGAA GYIASWLVKL LLEKGYTVKG TVRNPGTAHL KALDGAAERL VLCKADLLDY DAIRRAVHGC
101: QGVFHTASPV TDDPEQMVEP AVRGTQYVVN AAAEAGTVRR VVFTSSIGAV TMDPGRGPDV VVDESCWSDL EFCKRTRNWY CYGKAVAEQA ARDLCRQRGL
201: ELAVVNPVLV VGPLLQPAVN ASIGHVLKYL DGSARTFANA VQAYVDVRDV ADAHLRVFES PRASGGRYLC AESVLHREDV VRILAKLFPE YPVPTRFSNQ
301: KLRDLGLVFR PVSQSLYDTV KNLQEKGHLA VLGEQTTTTT TEAGREECPA ADLQQQGGIA IRA
101: QGVFHTASPV TDDPEQMVEP AVRGTQYVVN AAAEAGTVRR VVFTSSIGAV TMDPGRGPDV VVDESCWSDL EFCKRTRNWY CYGKAVAEQA ARDLCRQRGL
201: ELAVVNPVLV VGPLLQPAVN ASIGHVLKYL DGSARTFANA VQAYVDVRDV ADAHLRVFES PRASGGRYLC AESVLHREDV VRILAKLFPE YPVPTRFSNQ
301: KLRDLGLVFR PVSQSLYDTV KNLQEKGHLA VLGEQTTTTT TEAGREECPA ADLQQQGGIA IRA
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.