Factsheet for Zm00001d012980_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0818200-01	Rice	cytosol	77.95	77.25
TraesCS5D01G486300.2	Wheat	cytosol	74.32	74.55
TraesCS5B01G486500.1	Wheat	cytosol	74.02	74.24
TraesCS5A01G473600.1	Wheat	cytosol	73.11	73.33
Zm00001d012982_P001	Maize	cytosol	75.83	67.29
GSMUA_Achr4P18740_001	Banana	cytosol, extracellular, plastid	63.75	66.14
HORVU5Hr1G112340.7	Barley	cytosol, plastid	74.32	65.6
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	62.24	63.78
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	62.24	63.78
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	61.93	63.47
KRH72740	Soybean	cytosol	60.42	62.5
AT5G58490.1	Thale cress	cytosol	60.73	62.04
VIT_06s0004g07130.t01	Wine grape	cytosol	61.33	61.7
PGSC0003DMT400065273	Potato	cytosol	58.91	60.19
Solyc11g072510.1.1	Tomato	cytosol, extracellular	58.31	59.57
KRH30171	Soybean	nucleus	54.98	56.7
KRG98212	Soybean	endoplasmic reticulum	53.47	55.14
KRH17091	Soybean	cytosol, golgi, plastid	59.82	55.0
Zm00001d012981_P002	Maize	cytosol	63.44	47.4
Zm00001d043013_P001	Maize	cytosol	35.35	46.61
Zm00001d045101_P001	Maize	cytosol	42.9	41.76
Zm00001d019669_P001	Maize	cytosol	40.79	39.59
Zm00001d008331_P001	Maize	cytosol	38.07	38.53
Zm00001d050417_P001	Maize	cytosol	41.69	38.02
Zm00001d008332_P001	Maize	cytosol	37.46	37.92
Zm00001d015513_P001	Maize	golgi, peroxisome, plastid, vacuole	38.37	36.71
Zm00001d020970_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	36.25	36.25
Zm00001d032152_P001	Maize	cytosol	44.11	35.78
Zm00001d015956_P002	Maize	plastid	39.58	34.2
Zm00001d051938_P002	Maize	cytosol	37.76	33.78
Zm00001d031488_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	28.7	27.7

Protein Annotations

EntrezGene:100191263	EntrezGene:100280114	Gene3D:3.40.50.720	MapMan:35.1	ProteinID:AQK62045.1	ProteinID:AQK62049.1
UniProt:B4F867	EMBL:BT033305	EMBL:BT042131	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF369
SUPFAM:SSF51735	UniParc:UPI00017B638B	EnsemblPlantsGene:Zm00001d012980	EnsemblPlants:Zm00001d012980_P001	EnsemblPlants:Zm00001d012980_T001	SEG:seg

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr5:-:2680365..2689832

Molecular Weight (calculated)

35555.9 Da

IEP (calculated)

6.597

GRAVY (calculated)

0.050

Length

331 amino acids

Sequence
(BLAST)

001: MASVEGKRET VLVTGASGFI GSTLVGLLLD RGYNVHASVL NPDDKAETEH LVALGAGAGE GRLRVFPGDL LDGAALMAAA RGCSGVFHLA TPCTVYPVSD
101: PQGQMVVPAV EGTLNVLRAA KEARTVRRVV VTSSSSAIIP SPAWPAGEPR DERCWADVDY CKKNEVWYPV SKTLAEKAAW RFAEENGVDV VVVNPVTAMG
201: PMIPPTINCS MIVLLRLLQG CTEEYRDIWM GAVHVHDAAM AHILVFESPA ASGRHICAQS ISHWSDFAAK VAELYPEYKV PKFPKDTQPG LVRQGAEEGS
301: KKLVALGLHF SPLEKIIRDA VEALKSRGYI S

Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)

001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.