Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G486300.2 | Wheat | cytosol | 98.48 | 98.48 |
| TraesCS5A01G473600.1 | Wheat | cytosol | 97.88 | 97.88 |
| HORVU5Hr1G112340.7 | Barley | cytosol, plastid | 96.67 | 85.07 |
| EER93204 | Sorghum | cytosol | 82.12 | 82.12 |
| Os03t0818200-01 | Rice | cytosol | 83.03 | 82.04 |
| KXG37270 | Sorghum | cytosol | 78.48 | 78.96 |
| Zm00001d012980_P001 | Maize | cytosol | 74.24 | 74.02 |
| Zm00001d012982_P001 | Maize | cytosol | 82.42 | 72.92 |
| GSMUA_Achr4P18740_001 | Banana | cytosol, extracellular, plastid | 68.48 | 70.85 |
| CDY32979 | Canola | cytosol, endoplasmic reticulum, peroxisome | 63.94 | 65.33 |
| CDY57397 | Canola | cytosol, endoplasmic reticulum, peroxisome | 63.94 | 65.33 |
| KRH72740 | Soybean | cytosol | 63.33 | 65.31 |
| VIT_06s0004g07130.t01 | Wine grape | cytosol | 64.85 | 65.05 |
| Bra002645.1-P | Field mustard | cytosol, endoplasmic reticulum, peroxisome | 63.64 | 65.02 |
| PGSC0003DMT400065273 | Potato | cytosol | 61.82 | 62.96 |
| AT5G58490.1 | Thale cress | cytosol | 61.21 | 62.35 |
| Solyc11g072510.1.1 | Tomato | cytosol, extracellular | 61.21 | 62.35 |
| KRH30171 | Soybean | nucleus | 56.06 | 57.63 |
| KRH17091 | Soybean | cytosol, golgi, plastid | 62.73 | 57.5 |
| KRG98212 | Soybean | endoplasmic reticulum | 54.85 | 56.39 |
| TraesCS3B01G380600.1 | Wheat | cytosol | 52.12 | 52.12 |
| TraesCS3B01G380500.1 | Wheat | cytosol | 51.52 | 51.99 |
| Zm00001d012981_P002 | Maize | cytosol | 58.79 | 43.79 |
| TraesCS5B01G547200.1 | Wheat | unclear | 43.33 | 43.33 |
| TraesCS5B01G547000.1 | Wheat | golgi | 42.73 | 42.73 |
| TraesCS5B01G546700.1 | Wheat | peroxisome, plastid | 28.48 | 41.59 |
| TraesCS6B01G420500.1 | Wheat | cytosol | 42.42 | 41.42 |
| TraesCS5B01G223700.2 | Wheat | cytosol | 44.55 | 41.18 |
| TraesCS5B01G069500.1 | Wheat | cytosol | 40.91 | 39.82 |
| TraesCS5B01G069600.1 | Wheat | cytosol, mitochondrion, peroxisome | 40.3 | 39.58 |
| TraesCS3B01G036600.1 | Wheat | cytosol | 39.39 | 39.51 |
| TraesCS7B01G052700.1 | Wheat | plastid | 43.64 | 39.02 |
| TraesCS6B01G420200.1 | Wheat | cytosol | 40.61 | 38.84 |
| TraesCS6B01G420900.1 | Wheat | peroxisome | 40.3 | 38.78 |
| TraesCS6B01G420000.1 | Wheat | cytosol | 40.3 | 38.55 |
| TraesCS7B01G052600.1 | Wheat | cytosol | 43.03 | 36.13 |
| TraesCS5B01G414300.1 | Wheat | cytosol | 36.67 | 36.12 |
| TraesCS7B01G141100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 35.76 | 35.87 |
| TraesCS6B01G175600.2 | Wheat | plastid | 40.0 | 34.46 |
| TraesCS5B01G160700.1 | Wheat | cytosol | 37.88 | 34.25 |
| TraesCS5B01G271500.1 | Wheat | mitochondrion | 35.45 | 33.62 |
| TraesCS5B01G414500.1 | Wheat | mitochondrion, plastid | 36.97 | 33.52 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G486500.1 | EnsemblPlantsGene:TraesCS5B01G486500 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0050662 |
| InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF369 | PFAM:PF01370 | SEG:seg |
| SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:657728268..657730524
Molecular Weight (calculated)
35535.8 Da
IEP (calculated)
5.113
GRAVY (calculated)
0.096
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGVGEARG ETVLVTGASG FIGSWTVRLL LARGYDVHAA VLNPDDKAET EHLLALAGGD EARVRFFPCD LLDGAAMLAA ARGCSGVFHL ASPCTVDRVL
101: DPQKELVVPA VEGTLNVLRA AKEAGGVRRV VVTSSVSAVV PSPGWPAGEV LDERCWTDID YCEKNGVWYP ASKTLAEKAA WKFAEENGLD VVVVNPGTVL
201: GPMIPPRINA SMAMFLRLLE GCTEEYKDFF IGPVHVEDVA LAHITLFENP SASGRHLCVE PICHWSDFAS KVAELYPDYK VPKFPEDTQP GLVRAEAVPK
301: KLKALGLQFT PLEKIIRDAV ESLRSRGCIA
101: DPQKELVVPA VEGTLNVLRA AKEAGGVRRV VVTSSVSAVV PSPGWPAGEV LDERCWTDID YCEKNGVWYP ASKTLAEKAA WKFAEENGLD VVVVNPGTVL
201: GPMIPPRINA SMAMFLRLLE GCTEEYKDFF IGPVHVEDVA LAHITLFENP SASGRHLCVE PICHWSDFAS KVAELYPDYK VPKFPEDTQP GLVRAEAVPK
301: KLKALGLQFT PLEKIIRDAV ESLRSRGCIA
001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS
Arabidopsis Description
Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.