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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, golgi, mitochondrion, peroxisome, plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:peroxisome
Predotar:plastid
PProwler:peroxisome
TargetP:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G136600.2 Wheat extracellular, vacuole 87.21 97.09
HORVU6Hr1G028980.18 Barley endoplasmic reticulum, extracellular 81.98 91.01
EES04640 Sorghum golgi, plastid 77.81 86.88
Os02t0180700-01 Rice extracellular 77.55 86.34
Zm00001d015513_P001 Maize golgi, peroxisome, plastid, vacuole 75.72 83.81
TraesCS6A01G147300.1 Wheat cytosol, endoplasmic reticulum, peroxisome 85.64 77.0
GSMUA_Achr11P... Banana plastid 56.92 65.47
PGSC0003DMT400051049 Potato endoplasmic reticulum, peroxisome, plastid 52.22 60.24
Solyc03g116910.2.1 Tomato endoplasmic reticulum, peroxisome, plastid 51.96 59.94
KRH47350 Soybean cytosol 51.44 59.34
Solyc06g068440.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plastid 50.65 58.43
CDY35052 Canola cytosol 42.04 58.33
KRH44552 Soybean cytosol 50.65 58.26
PGSC0003DMT400073398 Potato cytosol, endoplasmic reticulum, mitochondrion, plastid 50.39 58.13
KRH09656 Soybean cytosol 50.91 58.04
AT1G80820.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 49.61 57.23
VIT_09s0070g00240.t01 Wine grape cytosol 50.39 57.1
CDY63972 Canola cytosol 49.35 57.1
CDX87345 Canola cytosol 49.09 56.63
Bra035150.1-P Field mustard cytosol 49.09 56.63
TraesCS5B01G223700.2 Wheat cytosol 52.74 56.58
KRH23636 Soybean cytosol 49.87 56.51
CDY64860 Canola cytosol 48.83 56.5
Bra008438.1-P Field mustard cytosol 48.83 56.5
CDX81743 Canola cytosol 50.13 56.47
TraesCS5B01G160700.1 Wheat cytosol 53.52 56.16
CDY39941 Canola cytosol 48.56 56.02
Bra026090.1-P Field mustard cytosol 49.87 56.01
Bra026737.1-P Field mustard cytosol 50.13 55.98
CDY52857 Canola cytosol 50.13 55.98
CDY33365 Canola cytosol 49.87 55.69
AT1G15950.1 Thale cress cytosol 49.61 55.23
TraesCS5B01G069600.1 Wheat cytosol, mitochondrion, peroxisome 48.3 55.06
TraesCS5B01G069500.1 Wheat cytosol 47.26 53.39
TraesCS7B01G052700.1 Wheat plastid 51.44 53.39
TraesCS7B01G052600.1 Wheat cytosol 51.17 49.87
TraesCS6B01G420000.1 Wheat cytosol 44.13 48.99
TraesCS5B01G414300.1 Wheat cytosol 42.56 48.66
TraesCS6B01G420200.1 Wheat cytosol 43.34 48.12
TraesCS6B01G420900.1 Wheat peroxisome 42.56 47.52
TraesCS6B01G420500.1 Wheat cytosol 41.78 47.34
TraesCS5B01G414500.1 Wheat mitochondrion, plastid 42.56 44.78
TraesCS5B01G547200.1 Wheat unclear 34.99 40.61
TraesCS5B01G486500.1 Wheat cytosol 34.46 40.0
TraesCS5B01G547000.1 Wheat golgi 33.68 39.09
TraesCS7B01G141100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 32.64 37.99
TraesCS3B01G380500.1 Wheat cytosol 32.11 37.61
TraesCS3B01G380600.1 Wheat cytosol 32.38 37.58
TraesCS3B01G036600.1 Wheat cytosol 31.85 37.08
TraesCS5B01G271500.1 Wheat mitochondrion 31.59 34.77
TraesCS5B01G546700.1 Wheat peroxisome, plastid 19.84 33.63
Protein Annotations
EnsemblPlants:TraesCS6B01G175600.2EnsemblPlantsGene:TraesCS6B01G175600GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0050662
InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF432PFAM:PF01370SUPFAM:SSF51735
TIGR:cd08958TMHMM:TMhelixMapMan:21.6.1.5:::
Description
No Description!
Coordinates
chr6B:-:191539624..191541952
Molecular Weight (calculated)
41621.3 Da
IEP (calculated)
8.459
GRAVY (calculated)
-0.123
Length
383 amino acids
Sequence
(BLAST)
001: MAVVVCVTGA GGFIGSWIVK LLLARGYAVR GTSRHAGTVP LAVSRCVPLP PKILGRAGSA KSAPGMDWAD QLLRADGPKN AHLWALDGAA ERLTMVQVDL
101: LDRASLRAAF DGCDGVIHTA SPMHDTPEEI IEPVITGTLN VVEMAADAGV RRVVLSSTIG TMYMNPHRDP DAPLDESCWS DLDYCKQTKN WYCYAKTIAE
201: RGAWEAARAL GLDLAVVIPV VTLGELLQPS MNTSTKHILK YLTGEAKAYV NESHAYVHVK DAAEAHVRVL EAPNAGGRRY VCAERTLHRG ELCRILAGLF
301: PEYPIPTRCK DEVNPPKKGY KYTNQPLKDL GIKFTPVQEY LYEAVKSLQE KGFIHKASGT KVPASRGSSL PQNSTAPMFM SKL
Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.